| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2163 |
|---|
| Symbol | |
|---|
| ID | 6309954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2313220 |
|---|
| End bp | 2313960 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650888 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_001924860 |
|---|
| Protein GI | 188581415 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC GGACGGCCGA TCCGCCCGCC CCGCCGGGCC TTGCCGAAGC GCCGGCCGCC
GCCGACGAGA CGCCGCATTA TCACGGCCAT CGCGAACGCC TGCGCACCCG CTTCGCCGAG
GCCGGCGCCG ACGCGCTCGC CGATTACGAA CTGCTCGAAC TCGCCCTGTT CCGGTCGATC
CCGCGGCGGG ACGTGAAGCC GCTCGCCAAG GCGCTGATCC GCCGGTTCGG CTCCTTCGCC
GAAGTGGTCA GCGCCGAGCC CGCCCGGCTC GCCGAAGTGG AGGGCGTGAG CGCCGGCGTC
GCCGCCGACC TCAAGCTGAT CGAGGCCGCC GGCCGGCGCC TTGCCCGCGG TGCCATCGCG
GCCCGCCCGC TGCTCTCGTC GTGGAGTGCG CTCCTCGAAT ATCTGCGCGC CACCATGGCC
TTCTCGGGCC GCGAGGAATT CCGGGTTCTG TTCCTCGACC GGCGCAACCA CCTCATCGCC
GACGAGGTGC AGGGCCGCGG CACCGTCGAT CACACGCCGG TCTATCCCCG CGAGGTGGCG
CGCCGGGCAC TCGAACTCGC GGCCACCGCG ATCATCCTCG CCCACAACCA TCCCTCCGGC
GACCCGACGC CGTCGGGCGC CGACATCCGC ATGACGCGGG AGATCGTCTC GGTGCTCGAT
CCCCTCGGCA TCGTCGTGCA CGACCACGTC ATCCTCGGCC GCGACGGTCA TGCGAGCCTG
AAAGGGCTCA AGCTGATCTG A
|
|---|
| Protein sequence | MARRTADPPA PPGLAEAPAA ADETPHYHGH RERLRTRFAE AGADALADYE LLELALFRSI
PRRDVKPLAK ALIRRFGSFA EVVSAEPARL AEVEGVSAGV AADLKLIEAA GRRLARGAIA
ARPLLSSWSA LLEYLRATMA FSGREEFRVL FLDRRNHLIA DEVQGRGTVD HTPVYPREVA
RRALELAATA IILAHNHPSG DPTPSGADIR MTREIVSVLD PLGIVVHDHV ILGRDGHASL
KGLKLI
|
|---|
| |