Gene Mpop_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1962 
Symbol 
ID6312847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2097725 
End bp2098345 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content75% 
IMG OID642650686 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_001924660 
Protein GI188581215 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.249162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCA TCGACGCGCT GATGCGCTCC GTTCCCGTCA TTCCGGTTCT GGTGGTGGAG 
GATGCCGCGG ACGCGGTGCC GATCGCCGAG GCGCTGGTCG GCGGCGGACT CACCGCCCTC
GAAGTCACGC TCCGCACCCC GGCGGCGCTC GATGTGATCC GGGCGATGGC GAGCGTCGAG
GGCGCGGTGG TGGGCGCCGG GACGGTGCTG AACGCGCGCG ATCTCGATGC CGCCATCGGC
GCGGGCGCGA AGTTCGTCGT CAGCCCCGGC CTCACCGCGC CGCTGACGGA GGCCGCCATC
GCCTCCGGCG TGCCCTACCT GCCGGGCGTG GCGACCTCCG CCGACATCAT GCGTGGCCTC
GACCACGGGC TCGACCGCTT CAAGTTCTTC CCGGCTGAGG CCGCGGGCGG GCTGAAGGCG
CTGAAGGCGC TGGCTGCGCC CTTCGGGCCG GTGCGCTTCT GCCCGACGGG CGGCATCACC
GAGGCCACCG CCGGCGACTG GCTCGCCCAT CCCGCCGTGC TCTGCGTCGG CGGAAGCTGG
GTGGTGCCCG CGGGTAAGCC CGACCCGGCC GCAATCCGCC GGCTCGCCGA GGCCGCCGCG
CGCCTGCGGC CCGGCCGGTA G
 
Protein sequence
MSPIDALMRS VPVIPVLVVE DAADAVPIAE ALVGGGLTAL EVTLRTPAAL DVIRAMASVE 
GAVVGAGTVL NARDLDAAIG AGAKFVVSPG LTAPLTEAAI ASGVPYLPGV ATSADIMRGL
DHGLDRFKFF PAEAAGGLKA LKALAAPFGP VRFCPTGGIT EATAGDWLAH PAVLCVGGSW
VVPAGKPDPA AIRRLAEAAA RLRPGR