Gene Mpop_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1802 
Symbol 
ID6313134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1933377 
End bp1934258 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content66% 
IMG OID642650525 
ProductABC-2 type transporter 
Protein accessionYP_001924500 
Protein GI188581055 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.454939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CCTCGAACCC CACCGCGGCG AGCCCGGTGA AATCCGTACC CCATGCGGGC 
CGCCTCGACG CGGTCGGCTA CCTCATCGCG CTCGCCGGCA TCGTGCGCCG CGAGTTGCTG
CGCTTCTTCC ACCAGAAGGA GCGCTTCTTC TCGGCGATGG TGCGCCCGCT GGTCTGGCTG
TTCATCTTCG CGGCCGGCTT CCGCAACACG CTCGGCACCT CGATCACGCC GCCCTACGAG
ACCTACGTGC TCTACGAGGC CTACGTGATC CCGGGACTGG CCGTGATGAT CCAGCTCTTC
AACGGCATGC AATCCTCGCT CTCGATGGTC TACGACCGCG AGGTCGGCTC GATGAAGGTG
CTGCTCACCT CGCCCTATCC GCGCTGGACG CTGCTGCTCG CCAAGCTGGT GGCCGGCGTC
AGTGTCTCGA TCGTCCAGGC CTATGCGTTC CTGGCCATCG CATGGTTCTG GGACACCGGC
ATTCCGCCCG TCGGCTACCT CGCCGCCCTG CCGGCCTTCC TGGCCTCGGG GCTGATGCTC
GGAGCCATCG GACTGTTCCT GTCCTCGCTG GTGCGGCAGC TCGAGAACTT CGCGAGCGTC
ATGAATTTCG TGATCTTCCC GATGTTCTTT GCCTCTTCTG CCCTATATCC ACTCTGGCAG
GTTCGGGCAT CGAGCGAGTG GCTCTACCTG ATCTGTCAGG CCAACCCGTT CACCCACGCG
GTCGAGCTGG TGCGGTTCGC CCTCTACGGG CGTTTCGAGC CGGTCGCCTG CGCCGTCGTG
GTCGGCACCG GCCTCCTGTT CTTCACCCTC GCCGTGATCG CCTACGATCC AGGCCGTGGC
ATCATGGCCC GGCGCGGCGG ACCGGCCGGC GAAGCCGCCT GA
 
Protein sequence
MSASSNPTAA SPVKSVPHAG RLDAVGYLIA LAGIVRRELL RFFHQKERFF SAMVRPLVWL 
FIFAAGFRNT LGTSITPPYE TYVLYEAYVI PGLAVMIQLF NGMQSSLSMV YDREVGSMKV
LLTSPYPRWT LLLAKLVAGV SVSIVQAYAF LAIAWFWDTG IPPVGYLAAL PAFLASGLML
GAIGLFLSSL VRQLENFASV MNFVIFPMFF ASSALYPLWQ VRASSEWLYL ICQANPFTHA
VELVRFALYG RFEPVACAVV VGTGLLFFTL AVIAYDPGRG IMARRGGPAG EAA