| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1401 |
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| Symbol | |
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| ID | 6309908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1520504 |
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| End bp | 1522504 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642650127 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_001924103 |
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| Protein GI | 188580658 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0545424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGTCG AGATCGGCCA TTACGCGCTG GCGCTGGCGC TGGCGCTCTC CCTGGTGCAG
GCGGTGATGC CCGCCTGGGC GGCCCGCTCG GGCGACGCCG CCTTGCGCGA GGTGGCGGGC
CCCGCCGCGC TCGGCACCTT CGCCTGCATC CTGTTCGCCT TCTGTGCGCT GACCTACGCG
CATGTGACCT CGGACTTCTC GGTCCAGAAC GTCATCGAGA ACTCGCACAC CGCCAAGCCC
TTGATCTACA AGATCTCCGG CGTCTGGGGG AACCACGAGG GCTCGATGCT CCTCTGGGTG
CTGATCCTCG CCCTCTTCGG GGCCTGGGTC GCCACCGCCA AGAATTCGGT GCCGCCGGTG
CTGCGCACCA ACGCGCTGAT GGTGCAGGCG AGCGTCACCT TCGTCTTCGT GCTGTTCATC
ATCACGACCT CGAACCCGTT CGCCCGCGTC GCGCCGGCAC CGCTCGAGGG CAACGACCTC
AATCCGCTGC TGCAGGATTT CGGCCTCGCG ATCCATCCGC CGCTGCTCTA CCTCGGCTAT
GTCGGCTTCT CGGTCACCTT CGCCTTCGCC GTCGCCGCCC TGATCGAGGG GCGCATCGAC
GCCGTCTGGG CGCGGGCGGT GCGGCCCTGG GCCCTGATCG CCTGGAGCTT CCTGACGCTC
GGCATCGCCA TGGGCTCGTA CTGGGCCTAT TACGAACTCG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TCGAGAACGC CTCGCTGATG CCGTGGATCG CCGGCACCGC ACTGCTGCAC
TCCATCGTCG TCATGGAGAA GCGCGACGCG CTCAAGGTCT GGACGGTCTT GCTCGCCATC
CTCACCTTCT CGCTCTCGCT GGTCGGCACC TTCATCGTCC GCTCAGGCCT GCTCACCTCG
GTGCACAGCT TCGCCTCCGA TCCGAGCCGC GGCGTGTTCA TCCTCGCCAT CCTCGCGCTG
TTCATCGGCG GCTCGCTGAG CCTGTTCGCG TGGCGCGCGC CGACGCTACG CCAGGGCGGC
CTGTTCGCGC CGATCTCCCG CGAGGGGGCG CTGGTGATGA ACAACCTGTT CCTTGTCGCG
GCGTGTGCCA CGGTGTTCGT CGGCACGCTC TACCCGCTGC TGCTGGAGAT GCTGACCGGC
GAGAAGATCT CGGTCGGCCC GCCCTTCTTC AACTGGACCT TCATCCCGCT GGCGCTGCCG
CTCCTCGTGA TCGTGCCGTT CGGGCAGGCG CTGGCCTGGA AGCGGGGCGA TGCCGCGGCC
GCCGCCCAGC GCCTGTTCGC GGCCTTCGCG GTGGCGCTCG TCGTCGGGCT CGGCGCGGCG
GCGTTCGCCT GGGGCGGCCC GATCATGGCG CCCGTGGGCC TCGGCTTCGG CGCCTACCTC
ATCATCGGCT CGGCGCTGGA GATCTGGGCG CGCGCCCGCG GCTACGGCCA GAACCGGACC
CACGACCTCG CCACCACCTG GCGCCGGGCG ATCGGCCTGC CGCGCTCCGC CTGGGGCACG
GCACTGGCGC ATGCCGGCGT CGGCGTCGTC GTGCTCGGCA TCGCCGGCCA GGGCTGGGCG
ACGGAAGGAC TCGCGACGAT CCGGCCGGGC GGTCAGGTCG CCTCCGGCCC CTACGTCGCC
ACCCTCGACC GGGTCGGCCC GACCAAGGGC GAGAACTACG AGGAGACCAC CGCCTTCCTG
ACCCTGCGCA ACCGCGCGGG CGACTATGTC GGCACGGCCG AGACCGGCAA GCGCTTCTAC
CCCTCCCGCC GGATGACGGT GACCGAATCC GGCCTCAAGA CGGTCGGCGT CAGCCAGATC
TACGCCAGCC TCGGCGAGGT GATGCCCGAC GGCTCGATCG GCATGCGGCT CTACTACAAG
CCGCTGGTGC TGCTGATCTG GATCGGTTCG CTGATCATGG CGGCGGGTGG CGGCCTCTCC
CTCACCGACC GGCGCATGCG CGTCGGCGCC CCGGTCAAGG CGCGCGCCAA GCTGCCCCCC
TCCGCGGTGC CCGCCGAATG A
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| Protein sequence | MIVEIGHYAL ALALALSLVQ AVMPAWAARS GDAALREVAG PAALGTFACI LFAFCALTYA
HVTSDFSVQN VIENSHTAKP LIYKISGVWG NHEGSMLLWV LILALFGAWV ATAKNSVPPV
LRTNALMVQA SVTFVFVLFI ITTSNPFARV APAPLEGNDL NPLLQDFGLA IHPPLLYLGY
VGFSVTFAFA VAALIEGRID AVWARAVRPW ALIAWSFLTL GIAMGSYWAY YELGWGGWWF
WDPVENASLM PWIAGTALLH SIVVMEKRDA LKVWTVLLAI LTFSLSLVGT FIVRSGLLTS
VHSFASDPSR GVFILAILAL FIGGSLSLFA WRAPTLRQGG LFAPISREGA LVMNNLFLVA
ACATVFVGTL YPLLLEMLTG EKISVGPPFF NWTFIPLALP LLVIVPFGQA LAWKRGDAAA
AAQRLFAAFA VALVVGLGAA AFAWGGPIMA PVGLGFGAYL IIGSALEIWA RARGYGQNRT
HDLATTWRRA IGLPRSAWGT ALAHAGVGVV VLGIAGQGWA TEGLATIRPG GQVASGPYVA
TLDRVGPTKG ENYEETTAFL TLRNRAGDYV GTAETGKRFY PSRRMTVTES GLKTVGVSQI
YASLGEVMPD GSIGMRLYYK PLVLLIWIGS LIMAAGGGLS LTDRRMRVGA PVKARAKLPP
SAVPAE
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