| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1178 |
|---|
| Symbol | |
|---|
| ID | 6311204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1253354 |
|---|
| End bp | 1255204 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649896 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001923885 |
|---|
| Protein GI | 188580440 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.375911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.307553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCC CCCTGTCCCG ACAGCCCGAT TCCGATGAGA CCCGCGCTCC CCGCGGCGTC
CTCGCGCGGC TTGTCGGCTC CCTCACCCGC CCGCCGCTGA CTTGGCCGCG CGATCTCTGG
AACGCGGTCG GCCAGCGCGC CTCGTCGAGC CTGACGCGCC GCATCGTGGT GCTCAACCTC
GTCGGGCTCA TCGTCCTGCT GTTCGGCTTC CTCTACCTGA ACCAGTTCCG CCAAGGGCTG
ATCCAGGCGC GCGTGCAGAG CCTGCTGATC CAGGGCGACA TCATCGCCGG CGCCATCGCG
GCGCAGGCCT CGGTCGATAC CGACACGATC CGGGTCGATC CGGACAAGCT GCTGCAGCAG
CAGGCCGGCG AGGGCCGCGA CTTCGAGGAC GATCCCGCCT CGCTCGCCTT CTCGCTCAAC
CCCGAGAAGG TCGCCCCCCT CCTGCGCCGC CTCGTGACGC CGACGGGCAA CCGCGCTCGG
GTCTACGACC GCGAAGGCAG CCTGCTGTTC GACACCCGCT CGCTCTACGC CCGCGGCGAC
ATCGCCCGCA GCGACGCCGC GGTGAAGCCG CCCAAGCCCA ACGTCCTGGA GCGGATCTGG
GACTTCGTCG GCAATCGCAT CCTCGGCCTC GTCGTCAGCG AGCGCTCGGC CCAGGAGGAG
GCGGGCCCGC AGGACGGGCG CGCCTTCCGC GAGGTCCAGG CGGCCTTGAA GGGCTCGCGC
GGGACCATCT CCCGCCGCAA CGAGCGCGGC GAGACCATCG TCTCGGTGGC GGTGCCGATC
CAGCGGGCCG GCTCGGTGCG CGGCGTGCTG ATGGTCTCGA CGCAGGGCGG CGACATCGAC
CGGGTGATCG CCTCCGAGCG CTTCGGCCTG CTCCAGGTGT TCCTCGTCGC CGCCGCCGTG
ATGCTGGTCC TGTCGATCCT GCTCGCGGGC GCCATCGCCG GGCCGGTGCG GCGGCTGGCC
GATGCCGCCG AGCGGGTGCG CCGGGGCATC AAGTCGCGCC AGGAGATCCC GGACTTCACC
AACCGCACCG ACGAGATCGG CCATCTCTCC GGCGCGCTGC GCGACATGAC CCAGGCGCTC
TACCGCCGGC TCGACGCCAT CGAGAGTTTC GCGGCGGATG TCAGCCACGA ATTGAAGAAC
CCGCTCACCT CCCTGCGCAG CGCGGTCGAG ACCCTGCCGC TGGCCAAGAC CGACGAGTCG
CGCGGCCGGC TCCTGCAGAT CATCCAGCAC GACGTGAAGC GCCTCGACCG GCTGATCTCC
GACATCTCCG ACGCCTCGCG CCTCGATGCC GAGCTCGCCC GCGCCGAGGC GCGCCGGGTC
GATCTCGGCA AGCTCCTCAC CACCGTGACC TCGGTCGCCA ACGAGCGGCG GCGCGGAAAG
GCGGCGCTGA TCCAGTTCGA CATCGAGCGG CCGGGCGCTG AGATTGAGGA CCCGTTCCGC
ATCATCGGCC ACGACAGCCG GCTCGGGCAG GTCGTCAACA ACCTGCTCGA CAACGCCCGC
TCGTTCTCGC CGCCCGGCGC CAAGGTGCGG GTGGCCCTGC GCCGCCTGAA GAACGAGGTC
GAGTTCGTGG TCGAGGACGA GGGGCCGGGC ATTCCCGAGC ACGCGCTCGA ACGGATCTTC
GAGCGCTTCT ATACCGACCG GCCGGAACAG GGCTTCGGCC AGAATTCCGG GCTCGGCCTG
TCGATCTCGC GGCAGATCAT TCAGGCCCAT CACGGCACGA TCCGCGCCGA GAACCGCCCC
GGCCCGGCCG ACGAGGAGGG GCAGCCGACG GTGCGTGGCG CCCGCTTCAT CGTCCGCCTG
CCCGTGGCCC CCCGGGCGGA CCGCTACGGC GAGGACGACC TCGCCGCATG A
|
|---|
| Protein sequence | MLAPLSRQPD SDETRAPRGV LARLVGSLTR PPLTWPRDLW NAVGQRASSS LTRRIVVLNL
VGLIVLLFGF LYLNQFRQGL IQARVQSLLI QGDIIAGAIA AQASVDTDTI RVDPDKLLQQ
QAGEGRDFED DPASLAFSLN PEKVAPLLRR LVTPTGNRAR VYDREGSLLF DTRSLYARGD
IARSDAAVKP PKPNVLERIW DFVGNRILGL VVSERSAQEE AGPQDGRAFR EVQAALKGSR
GTISRRNERG ETIVSVAVPI QRAGSVRGVL MVSTQGGDID RVIASERFGL LQVFLVAAAV
MLVLSILLAG AIAGPVRRLA DAAERVRRGI KSRQEIPDFT NRTDEIGHLS GALRDMTQAL
YRRLDAIESF AADVSHELKN PLTSLRSAVE TLPLAKTDES RGRLLQIIQH DVKRLDRLIS
DISDASRLDA ELARAEARRV DLGKLLTTVT SVANERRRGK AALIQFDIER PGAEIEDPFR
IIGHDSRLGQ VVNNLLDNAR SFSPPGAKVR VALRRLKNEV EFVVEDEGPG IPEHALERIF
ERFYTDRPEQ GFGQNSGLGL SISRQIIQAH HGTIRAENRP GPADEEGQPT VRGARFIVRL
PVAPRADRYG EDDLAA
|
|---|
| |