Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1172 |
Symbol | |
ID | 6311353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1248237 |
End bp | 1249310 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 642649890 |
Product | hypothetical protein |
Protein accession | YP_001923879 |
Protein GI | 188580434 |
COG category | [R] General function prediction only |
COG ID | [COG4671] Predicted glycosyl transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.669426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGTC CGCTCGGCTA CTACGTCCAT CATCAGGGGG CCGGGCATCT GCAGCGGGCG ATCGCGCTGT CGCGGGCCCT CGAGGCGCTG GGGCGGCCCT GCACGCTGAT GGGCAGCTTC GCCGGTCTCG ACACCGCGGG CGCCCCGGGG CCCGTTCTCG ACCTGCCCGA CGACCGCCTC GACCGCAGCT TCGACGGGCG GGACGGTGCG GGGCAGCGCC CCGAATGCTT CCACTACGTG CCGCTCAACC ATCCCGGCAT CCGCGCACGG ATGGGGCGGA TCGCCGCCTG GGCAGCGGAG AACGACCCGG CGCTGATCGT CGTTGACGTC TCGGCGGAGG TGGCGCTGCT CGCCCGGCTG CTGTCGGTGC CGAGCCTCGT GGTGCGCTTG TCCGGCACCC GCACCGACCG GCCGCATTTA GAGGCGTTCC GCGCCGCCTC GCGCCTGCTC GCCCCCTTCC CCGAAGCCCT GGACGGCGGC GACGTGCCGA ATTGGGTGCG CGAAAAGACC CTCTATGGCG GCTTCCTCGG AGGGGCGCCC GCGCGGGCGG CGCCGGAGGA GGATGGGCGC ATCGTCGTGG TGTTCGGCCG CGGCGGCGAG GGCGGCCGCC TGGACGCCCT GATCGAGGCC GCCGGAGCCG TGCCGGACCG TGCGTGGCAT GTGCTCGGCC CGGTCGTCGG CACGGGCTCG GCCCCGCAAA ACCTCCACCT GCATGGATGG GTCACGGATG TGCGCCCGCA CCTCGCCCCC GCTGCCCTCG TGGTCGGGGG CGCGGGCGAC GGGCTCGTCA CCGCGGTGGC GGCCCTCGGC AAGCGCTTCC TGTGCCTGCC CGAGCCCCGC GCCTACGACG AGCAGGAGGC CAAGGCGCAG GCGCTGGAGC GGCTCGGCGC AGCGGTGGTG CATCGCGGCT GGCCGGAGGC GGGCGCCTGG GCCGACCTCG TCACCCGCGG CCTCGCCCTC GATCCGGACG TCGTCCGGCG CCTTGCCGAG CCCGATGCGC TGACGCGCAC GGCGGCGGCG ATCGAGGCTC TGTGTCGGGA TGCGGATTGC ACCCCTCCGG AACGCGAGCC TTGA
|
Protein sequence | MTRPLGYYVH HQGAGHLQRA IALSRALEAL GRPCTLMGSF AGLDTAGAPG PVLDLPDDRL DRSFDGRDGA GQRPECFHYV PLNHPGIRAR MGRIAAWAAE NDPALIVVDV SAEVALLARL LSVPSLVVRL SGTRTDRPHL EAFRAASRLL APFPEALDGG DVPNWVREKT LYGGFLGGAP ARAAPEEDGR IVVVFGRGGE GGRLDALIEA AGAVPDRAWH VLGPVVGTGS APQNLHLHGW VTDVRPHLAP AALVVGGAGD GLVTAVAALG KRFLCLPEPR AYDEQEAKAQ ALERLGAAVV HRGWPEAGAW ADLVTRGLAL DPDVVRRLAE PDALTRTAAA IEALCRDADC TPPEREP
|
| |