| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1117 |
|---|
| Symbol | |
|---|
| ID | 6312977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1189039 |
|---|
| End bp | 1190193 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642649836 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_001923825 |
|---|
| Protein GI | 188580380 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.246215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCA AGCTTGTGCC GCCGGCCCGG AAAGACGGAT TTCGCCTCGT GTCAGCCCAT
TCTTTCTCCC GCAGACACCT GCTCGGCGGC GCGGCCGCCC TCTCGCTCGG CGCGCTGCCC
TTCGGCCGCG CCCGGGCCGC CGGCCCGCTC ACCGTCGGCT TCATCTATGT CGGGCCGAAG
GACGATTACG GCTACAACCA AGCCCATGCT CAAGGCGCCG CCGCCCTGAA GGCGATCCCC
GGCGTTCAGG TGGTCGAGGA GGAGAACGTC CGCGAGACCA CCGACGTCCA GAAGACCATG
GAGAGCATGA TCAACCTGGA CGGTGCGACC CTGGTCTTCC CGACTTCCTT CGGCTACTTC
GATCCGCACG TCCTCATCGA GGCCAAGAAG AACCCGAAGG TGCAGTTCCG CCATTGCGGC
GGCCTCTGGA CCGAGGCGAA TCCGAAGAAC GCCGGCTCGT ATTTCGGCTA CATCGCCCAG
GGGCAGTACC TGAACGGCAT CGTCGCCGCC CACGCCTCGA AGTCGAAGCG GCTCGGTTTC
GTCGCGGCCA AGCCGATCCC GCAGGTTCTC AACAACATCA ACGGCTTCCT GCTCGGTGCG
CGCAGCGTCG ATCCGTCGAT CACGGTTCAG GTGATCTTCA CCGGCGAGTG GTCGCTGGCC
GTCAAGGAGG CGGAAGCGAC CAACGCGCTG ATCGACGGCG GCGCCGACGT GATCACCTGC
CACGTCGATA GCCCCAAGGT CGTGGTCGAG ACCGCCGCGC GGCGCGGGGC CTTCGTCTGC
GGCTACCACG CCGACCAGTC GGCGCTGGCC AAGGACAAGT ACCTCACCGG CGCGGAGTGG
AACTGGGCCT CGATCTACAA GGGCTTCGTC GCCGACATGC AGGCGGGCAA GGCGCCGCCG
AACTTCGTGC GCGGCGGCCT GCCGGACGGC TTCGTGAAGA TGAGCCCCTA CGGCCCCGCG
GTCTCCGAGG AAGCCCGCAA GCAGGCCGAC GCCGTCAAGG CCGAGATGAT GAAGGGCGGC
TTCGCCATCA TCAAGGGGCC GCTCAAGGAC AACAAGGGCA ACGAGATCGC CGGGGCCGGT
ACGGCGTTGG CCGAGAACGC GGCCGCGCTC GAGAAGACCA ACTACCTCGT CGAGGGCGTG
AAGGGCTCGG CCTGA
|
|---|
| Protein sequence | MLAKLVPPAR KDGFRLVSAH SFSRRHLLGG AAALSLGALP FGRARAAGPL TVGFIYVGPK
DDYGYNQAHA QGAAALKAIP GVQVVEEENV RETTDVQKTM ESMINLDGAT LVFPTSFGYF
DPHVLIEAKK NPKVQFRHCG GLWTEANPKN AGSYFGYIAQ GQYLNGIVAA HASKSKRLGF
VAAKPIPQVL NNINGFLLGA RSVDPSITVQ VIFTGEWSLA VKEAEATNAL IDGGADVITC
HVDSPKVVVE TAARRGAFVC GYHADQSALA KDKYLTGAEW NWASIYKGFV ADMQAGKAPP
NFVRGGLPDG FVKMSPYGPA VSEEARKQAD AVKAEMMKGG FAIIKGPLKD NKGNEIAGAG
TALAENAAAL EKTNYLVEGV KGSA
|
|---|
| |