| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1075 |
|---|
| Symbol | |
|---|
| ID | 6309141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1148380 |
|---|
| End bp | 1149510 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642649796 |
|---|
| Product | Luciferase-like monooxygenase |
|---|
| Protein accession | YP_001923785 |
|---|
| Protein GI | 188580340 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03612] pyrimidine utilization protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.206866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0331405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG CCAACAATCA CGCCAACAAT CACGCCATGA ATATCGGCGT CTTCATTCCG
ATCGGCAACA ACGGCTGGCT TCTGTCGGAG AACGCTCCGC AGTACATGCC GAGCTTCGAA
CTCAACAAGC AGATCACGCT CAAGGCGGAA CAGTACGGTC TCGACTTCGC GCTCTCGATG
ATCAAGCTGC GCGGCTTCGG CGGCAAGACC GAGTTCTGGG ACCACAACCT CGAATCCTTC
ACGCTGATGG CCGGGCTCGC GGCGGTCACG AGCCGGATCA AGCTCTACGC CACGGCGCCG
ACCCTGTGCC TGCCGCCGGC CATCGTCGCG CGCATGGCCT CGACCATCGA CTCGATCTCG
AACGGCCGCT TCGGCCTCAA TCTCGTCACC GGCTGGCAGC GGCCGGAATA TTCCCAGATG
GGCCTTTGGC CCGGCGACGA ATACTTCGGC CGCCGCTACG CGTATCTCTC CGAATACGCG
CAGGTGCTGC GCGATCTGTG GGAGACCGGA AGCAGCGATC TCAAGGGCGA ATTCTTCCAG
ATGGAGGATT GCCGCCTGAG CCCGCGCCCG CAGGCGGAGA TGAAGATCAT CTGCGCCGGG
CAGAGCGCCG CCGGCATGGC CTTCACCGCG ACCTACGCCG ACTACAATTT CTGCTTCGGC
AAGGGGGTCA ACACGCCGAC CGCCTTCGCC CCGACCGTGG AGCGGCTGGA GGAGGCCAAG
GCGAAGACCG GCCGCGACGT GTCCTCCTAC GTCCTGTTCA TGATCATCAG CGACGAGACC
GACGAGGCGG CCCGCGCCAA GTGGGAGCAC TACAAGGCCG GCGCGGATCA GGAAGCGATC
GCGTGGCTCG GCCTCCAGGG CGCGGCCGAC ACCAAGTCCG GCGCCGACAC CAACATCCGC
CAGATGGCCG ACCCGACCTC GGCGGTGAAC ATCAACATGG GCACACTGGT GGGCTCCTAC
GCGACCGTCG CCGCGCTCCT CGACGAGGTG GTGACCGTGC CGGGCACCGG CGGCGTGCTG
CTCGTCTTCG ACGACTTCCT GAAGGGCCTC GACGATTTCG GCACGAAGAT CCAGCCGCTG
ATGGCCTCGC GCCGGCACGT CACCGGCGAA GCGCTGGCGG AGGTGGCGTG A
|
|---|
| Protein sequence | MTQANNHANN HAMNIGVFIP IGNNGWLLSE NAPQYMPSFE LNKQITLKAE QYGLDFALSM
IKLRGFGGKT EFWDHNLESF TLMAGLAAVT SRIKLYATAP TLCLPPAIVA RMASTIDSIS
NGRFGLNLVT GWQRPEYSQM GLWPGDEYFG RRYAYLSEYA QVLRDLWETG SSDLKGEFFQ
MEDCRLSPRP QAEMKIICAG QSAAGMAFTA TYADYNFCFG KGVNTPTAFA PTVERLEEAK
AKTGRDVSSY VLFMIISDET DEAARAKWEH YKAGADQEAI AWLGLQGAAD TKSGADTNIR
QMADPTSAVN INMGTLVGSY ATVAALLDEV VTVPGTGGVL LVFDDFLKGL DDFGTKIQPL
MASRRHVTGE ALAEVA
|
|---|
| |