Gene Mpop_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0948 
Symbol 
ID6308733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1002061 
End bp1002999 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID642649664 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_001923660 
Protein GI188580215 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.221618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.822372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AGAGAATATC CAATCTTTTC AATTTCTTCG ATCGCAGGCC TGAGGTCATC 
ATCGACACCG ATATCGGCGA CGACATCGAC GATGCATTCG CCATCGTATG GGCGCTCGTA
TCTCGCCGGC TGACCGTCAG AGCGATCCTT ACGGCGCATG GCGACACGGA ACTCAGAGCC
GCCCTGACGC GCAAACTGCT CCGGAGCTAC GGGAAGCAAG CGATTCCGGT CTGGGCCGGC
GTTGCGACGC AGACCGACGT GATCTTCACG CAAAAGGACT ATGCGGGCGA GGAACGATCG
CCTTCATCGG TCGATGGCAT TCATGCGACC CTGGACCTGA TCAGGAAGCG GCCGAACAGG
CTCACCCTGA TCGCGCTCGC GCCACTCCAC AACATCGGAG CGATGATCGA TCGCGATCCC
GCAACGTTCA AGACATTGAA GCGGGTCATC GTCATGGGCG GGTCCTTGAG GAGAGGATAC
AATTCTCCCA CGGGCGAACC GAATCTCACG CCCCAGGCGG AGCACAACAT CCATCTCAAT
CCCGGCGCGT TCGATCGGCT GCTGCAGAGC GGCGTTCCCA TCGTCATGAT GCCGCTGGAT
TCGGTCCAGG CGCGTCCGAG CGACGCCTTT CTGCACGTCG TCGGGGAAGC GCATCCGGAC
CTGCACCGGC TCCTCACCCT GTGGCAGCAC AACAATCCCT TCCAAGTGAC CCGGCCCACG
CTGTTCGATG TCGTGGCGAT GGCCGCCGCC ATCACCCCGC AGCGCTGCCC TCTGATCCCG
TTGCGGGTCG GCGTCGATGC GATCGGGATG ACGACGGAGA GCGAAGGCGC GGCCAATGTC
AGGGCCTGCC TCGAGACGGA TCACGAGGAA GCCCTCGGGG CCTTCATGCG CGACCTGTGC
CCGTCCTATT CCGGCCCATC GGCCCTGGCC TTACGCTGA
 
Protein sequence
MAIERISNLF NFFDRRPEVI IDTDIGDDID DAFAIVWALV SRRLTVRAIL TAHGDTELRA 
ALTRKLLRSY GKQAIPVWAG VATQTDVIFT QKDYAGEERS PSSVDGIHAT LDLIRKRPNR
LTLIALAPLH NIGAMIDRDP ATFKTLKRVI VMGGSLRRGY NSPTGEPNLT PQAEHNIHLN
PGAFDRLLQS GVPIVMMPLD SVQARPSDAF LHVVGEAHPD LHRLLTLWQH NNPFQVTRPT
LFDVVAMAAA ITPQRCPLIP LRVGVDAIGM TTESEGAANV RACLETDHEE ALGAFMRDLC
PSYSGPSALA LR