| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0894 |
|---|
| Symbol | prfA |
|---|
| ID | 6310066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 947618 |
|---|
| End bp | 948703 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642649610 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_001923607 |
|---|
| Protein GI | 188580162 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA TTCCTTCCGA TCGCCTCGAC GCCATCCTGG CTCGGCACGA GTTCGTCACG
GCGCAGCTCG CCGACGGCTC CGCCGACGCC GAGAGCATTG TGCAGCTCTC CCGCGAACTG
TCCGAGCTCG ACGGCGTGGT GGCGGCGATC CGTCATTACC GGGCGGCCGA GGCCAACCTC
GCCGGCATCC GTGCGCTGAT CGACGAGCCC GGCGGCGATC CCGAGATGCG GGCGCTCGCC
GCCGAGGAGA AGCCGGAGGC GGAAGAGGCG CTGGAGCAGG CCCACCGCGC CCTGCAACTG
ATGCTGCTGC CCAAGGACGC GGCCGACGAG AAGAGCGCGA TCCTCGAAAT CCGCGCCGGC
ACCGGCGGCG ACGAGGCCGC CCTGTTCGCG GGCGACCTGT TCCGGATGTA CGCCAAGTAT
GCCGAGTCGA AGGGCTGGCG CGTCGAGGTG ATCTCGGAGA GCGAGGGCAC CGTCGGCGGC
TATCGCGAGG TCGTCGCCGA GGTGAAGGGC CGCTCCGTGT TCTCGCGGCT CAAGTTCGAG
AGCGGTGCCC ACCGCGTCCA GCGCGTGCCC GACACCGAGA CGCAGGGCCG CATCCACACC
TCCGCCGCCA CGGTGGCGGT GCTGCCGGAG GCGGAGGAGG TCGACATCGC CATCAACGAG
GCCGACCTGA AGATCGACAC CATGCGGGCT CAAGGAGCCG GCGGCCAGCA CGTCAACAAG
ACGGAATCGG CGATCCGCAT CACCCACATG CCGACCGGCG TGGTGGTGTT CGTCCAGGAG
GAGCGCTCGC AGCACAAGAA CCGCGCCCGC GCCATGGCCC TGCTGCGCTC GAAGCTGTTC
GATGCCGAGC GCACCGCCAA GGATTCGGCC CGGGCCGCCG ACCGCAAGGC GCAGGTCGGC
TCCGGCGACC GCTCGGAGCG CATCCGCACC TACAACTTCC CGCAGGGGCG CGTCACCGAT
CACCGCATCA ACCTGACCCT CTACAAGCTG GAAGAGGTCA TGGCAGGGCC GGCGCTGGAC
GAAGTCATCG ACGCGCTGGT GACCGAGCAT CAGGCCGAGT TGCTGGCGGC CGAGGGGATG
GCGTGA
|
|---|
| Protein sequence | MTPIPSDRLD AILARHEFVT AQLADGSADA ESIVQLSREL SELDGVVAAI RHYRAAEANL
AGIRALIDEP GGDPEMRALA AEEKPEAEEA LEQAHRALQL MLLPKDAADE KSAILEIRAG
TGGDEAALFA GDLFRMYAKY AESKGWRVEV ISESEGTVGG YREVVAEVKG RSVFSRLKFE
SGAHRVQRVP DTETQGRIHT SAATVAVLPE AEEVDIAINE ADLKIDTMRA QGAGGQHVNK
TESAIRITHM PTGVVVFVQE ERSQHKNRAR AMALLRSKLF DAERTAKDSA RAADRKAQVG
SGDRSERIRT YNFPQGRVTD HRINLTLYKL EEVMAGPALD EVIDALVTEH QAELLAAEGM
A
|
|---|
| |