Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0889 |
Symbol | |
ID | 6309923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 939628 |
End bp | 941010 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642649605 |
Product | protein of unknown function DUF1078 domain protein |
Protein accession | YP_001923602 |
Protein GI | 188580157 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.466386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCT TTTCCGCGCT TCAGACCGCG GTCTCGGGCC TGAAGGCGCA GTCCTTCTCG CTGAGCAACA TCTCCGGCAA CATCGCGAAC TCGCAGACGA CCGGCTACAA GCGGATCGAC ACGAGTTTCG TCGACATGCT GGTCGACGGC GACGCCCGGA GCCAGACCGC GGGCTCGGTC GCGGCCTTCT CGGAACTGAC CAACTCGGTC CAGGGCAACA AGGTCTCGAC CGGCGTCTCG ACCAACATGG CGCTCGACGG CCAGGGCTTC TTCGTCGTGC GCAAGAAGAC CACCGATGCG GGCGGCGCCG AGAGCTTCTC CAACGCCAAC CTCTTCACCC GCCGCGGCGA CTTCGCCCCG GACAAGGACG GCTACCTCGT CAACGGCGCG GGCGCCTACC TCGTCGGCGC GAGCCTCGAC CCGGTGACCG GCCAGACCAC CGGCACGGGG CCGATCAAGA TCTCCAACGC GATCATCCCG GCCAAGCCGA CCACGACGAT CACCTACTCG GCCAACCTGC CCAAATCCCC TGCCACGACC AACGCCGCCT CGACCGGCGG TCTACTCTCC GCCTTCAGCG ACGGCACCGA CCCGCGGGTG ACGCCGGCCA ATGGCGCGAC GACGGGCACC GTCTCCGAGG CCAACGCGCA GAGCTTCATC GACAACAGCA TCGCCGGCCC GGCGCTGACC GTCTACACTG CCTCCGGCGC CCCCGTGAGC GTCCAGAGCC GGTGGGCCAA GGTGGCCGCC GCCGACACGG CGACCGGCAC GAGCGACACC TGGAATCTGT TCACCGCCGA CAAGACCAGC GTCACCGGCA ACCAGACGAG CTGGACCAAT ATCGGGCAGG CCTTCGCCTT CAGCGCCAGC GGGCAGATGA CGGCTCCGAC GGGAAAGACG GTCCCGATCA ACAACCTGAC CGTCGACGGC GTCAATGTCG GCCAGGTCAC CCTCGATCTT TCCGGCGGCC TGACGCAGTA CGCCGCCGCC TCCGGCACGG TGACGACCAA CGACCTCAAG CAGAACGGCT ACGCCTCCGG CTCGCTGAAC TCGGTCGAGG TCGGCGATAA CGGCCTCATC AGCGGCAAGT ATTCCAACGG CTCGGTGATC GGACTGGCCC GGGTCGAGGT GGCGCAGTTC GTCAACCCGG ACGGGCTGAA GCCGGATTCC CTCGGCAACT ACGAGCAGAC CGTGGCCTCG GGCGAGGCGA TCAACGGGCT CAAGGACTCG ACCGTGGTCG GGGCCAACGT CGAGCAGTCG AATACCGACA TTGCTGCGGA ATTTTCAAAG ATGATCGTTA CCCAACAGGC CTATTCCGCC AACACCCGGG TGATGTCGAC GGCGCAGACG ATGATCTCCG ACCTGTTGAA CGTCATCCGC TGA
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Protein sequence | MDVFSALQTA VSGLKAQSFS LSNISGNIAN SQTTGYKRID TSFVDMLVDG DARSQTAGSV AAFSELTNSV QGNKVSTGVS TNMALDGQGF FVVRKKTTDA GGAESFSNAN LFTRRGDFAP DKDGYLVNGA GAYLVGASLD PVTGQTTGTG PIKISNAIIP AKPTTTITYS ANLPKSPATT NAASTGGLLS AFSDGTDPRV TPANGATTGT VSEANAQSFI DNSIAGPALT VYTASGAPVS VQSRWAKVAA ADTATGTSDT WNLFTADKTS VTGNQTSWTN IGQAFAFSAS GQMTAPTGKT VPINNLTVDG VNVGQVTLDL SGGLTQYAAA SGTVTTNDLK QNGYASGSLN SVEVGDNGLI SGKYSNGSVI GLARVEVAQF VNPDGLKPDS LGNYEQTVAS GEAINGLKDS TVVGANVEQS NTDIAAEFSK MIVTQQAYSA NTRVMSTAQT MISDLLNVIR
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