| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0851 |
|---|
| Symbol | |
|---|
| ID | 6309877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 902515 |
|---|
| End bp | 905889 |
|---|
| Gene Length | 3375 bp |
|---|
| Protein Length | 1124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649567 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001923564 |
|---|
| Protein GI | 188580119 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.596817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGA GAACGAACCC GCCCGCTCGG TCGCCGGATT GGGGCGAGAC GGGACGGTTT
CGGGAGTTCG AGTGGGCCGA AGCCGCGCTT CGGGCCAGCG AGGAGAAGTA TCGCACCCTG
TTCCAGACCA TGGGACAGGG GTTCTGCGAA CTCGAATTCG TGCGCGATGC GCAGGGCCGT
GCCGTCGATT TCCGCTACAT CGAGCTGAAC CCCGCCTTCG AGCGGCTGGT CGGCGTGCCG
GCGGCGCAGG CGCGCGGCCG GGCGGGGCGG GAGGTCGTTC CGAAGCTCGA TCCCTGGTGG
GTCCAGACCT ACGAGCGGAT CGCCGCCGCG GGCGTGCCGG CGCGGCTCGA GCATACGGAC
ACGCCGCTGG GGCGCTGGTT CGAGGTCTTC GTCTATCCAC AGGCGAATGA CCGGCTGCTC
GTGCTCTACG ACGACGTCAG CGAGCGCAAG CGCGCCGAGA TGGCCCTGCG CGAGCGCGAG
GAGCGGCAGG CCTTTCTCCT GAGCCTGAGC GATGCGGTGC GCACCCTCAC CGATCCGGCC
GCGATCCAGG GCGAGGCCTG CCGGCTGATC GGCGAGCGGC TGGACGTCGG CCGGGCCTAC
TACGTCGCCA TCGACGAAGC GTCCGATCTC GCGCGGGTGG CATGGGACTA CGTTCGCGAG
GATGTCCCCT CGCTCGTCGG CGAGCACCGG ATCGCCGACT TCGCATGGTC CGTCGATATC
CTCCGCCGGG GCCTGTGCCA CGTCGTGGAC GACACGCAGA CCTCGGACAC GGTTCCGCAG
GCCGACCGCC CCGCCCTGGC CGCCCTGCGC ATCGCCGCCT GCATGGGCGC GCCGCTCATC
AAGAACGGCA GCCTCGTCGG CGCCCTCTGC GTCACCCATT CCGGTCCGCG GTCCTGGACG
GAGGGTGACG TCGGATTGCT GCGCGACGTC GCGGAGCGGA TCTGGTCCGC GGTCGAACGC
GGCCGGGCGG AGGCGGATAT CCGGCGCAAG AATGCCGTGC TCGAGGGGAT CAACCGCATC
TTCCGCAAGG CGCTGACCGC GCGCACGGAG GAGGAACTCG GCCGCGTCTG CCTCGCGGTG
GCCGAGGACG TGACGCAGAG CGCCTTCAGC TTCATGGGCG AGGTCAACCA CGAGAGCCGT
TGCTTCAACG AACTCTCCAT CAGCGACCGC GGCTGGGACC ATTTCGCGAT GGACGACCCC
GCCTTTTCGA AGGGTCTGCC TCCGACGGGA CTCAAGCTCC ACGGCCTCTA CGGCCGGGTG
CTGCAGGACG GGAAGAGCCT CATCGCCAAC GAGCCGGGCA GCCATCCCGA TCGGATCGGC
ACGCCGCGCG GCCACCCGCC GCTGAAGGCG TTCCTCGGGG TGCCGCTGAA GCGGGACGGG
CAGACCGTCG GGATGATCGG GCTCGGCAAC CGCGAAGGCG GGTACCGGAC GGAAGATCGC
GAGGCGGCCG AGGCGCTCGC CCCGGCGATC CTTCAGGCGC TGCTGAGCCG GCGCACCGCC
GACACCCTGC GCGAGAGCGA GGAGCGGTTC CGCACCCTCG CCGAACTCGT GCCGAGCCTG
CTGTGGAACT GCGATCCCGC GGGCAAGGTC GTCGTCGTGA ACCAGCAATG GGGTGACTAT
ACCGGCCAGG GACCGGACGA GATCCAGGAC GGTGGCTGGC TGGCGACGAT CCACCCCGAC
GAGATGGCGG AGACGGAGCG CGTCTTCACC GAGGCCTTCG CCACCGGTCG GTCGGTGGAG
CGGCAGCAGC GTATCCGCCG CCGCGACGGC GCCTACCGCT GGTTCCTGGT GCGCCACGCC
CCGGCGCGGG ACGCGGACGG CCGGATCACC CGCTGGTTCG GTGCCGCCAC GGACATCCAC
GACCAGCATC TCGCCTCGCA GAACCTGCGG GCGGAAGAAG CGCGGCAGGC CTTCCTGCTC
GACCTCGCCG ACCGGCTGCA GGGCCAGATG GATCCGCAAG CCGCCCTTCA CACCGTGGTC
GAGGCCTTGG GGCGCCATCT GGGCGCCGGC CGGGTCGGCT ACGCGCGCCT TTCCGCGGAC
GGCGAGCGGG TCGAGCGGCA GGTCGGCTAT CACGCCGAGA CCGAGGCCCG GCTCGGCCCC
CTGCCGATCA CCGCCTTCGG GCGGGCGATC CTCGACCGGC TCCGTGACGG CGAGACGATC
ATCGTGGACG ATGCCGCGGC CGTCACGACC CCCGGCGTCT GGCGACAGGG CGCCGTCGGG
AGCTTCGTGG CGGTGCCGCT GGTCCGGGAC GGCCGAGTGC GCACCGTCCT CTACCTGACC
CATCGCGAGC CCCGGACGTG GACGCGCTCC GAGACGACCC TGATCGAGGA GGTCGCCGCG
CGGACCTGGG AGGCGGCGGA GCGGGCGCAG GCCGAGACCG AGCTGCGGGC GAGCGAGGCG
CGCCAGCGCG CCCTGGTCGA AGGCATCCCG CAGCTCATCT GGCGCGCCGG CATCGACGGC
GCGTGGAGCT GGGCGAGCCC GCAATGGTGC CGCTATACCG GTCAGACCGA GGCCGAGAGC
CGCGGCTTCG GCTGGCTCGA CGCGGTCCAT CCCGAGGATC GCGACCGCGC CCAGGAGGTC
TGGGGTGGTG CCGCCGCGGC CGAGACGCTG ACCTTCGACT ACCGCATCCG TCATGCCCCG
GAGGGCCGCT ACCGCTGGTT CCAGTCGCGG GCGCTGCCGC TGCGCGAGGG CAGCGAGATC
ATCGAGTGGC TCGGCACGTC GACCGACATC GACGATCTGC GCCGGCTGCA GGAGCAGCAG
GACGTGATGG TCGCCGAGCT GCAGCACCGC ACCCGCAACC TCATCACGGT GGTGCGCTCG
CTCGCCGAGC AGACCATGGC CCGGAGCGCC TCGATGGAGG TGTTCCGCAG GCAGTTCTAC
GACCGGCTCT CCGTGCTCTC GCGGGTGCAG GGCCTGCTGT CCCGCTCCGG CATCGAGCCG
ATCACGCTGC ACGCGTTGAT CTCGACGGAA CTCGATGCCC TCGGCGCCGG GGAGGCGGCC
GACCGCATCT ATCTCGAAGG CCCCTCCGTG CGGCTGCGCA AGGCGATGGT GCAGACCCTG
GCGCTGGCCC TGCACGAACT CGCCACCAAC GCCCGCAAAT ACGGGGCGCT GGCGGGTAAT
GCGGGGCGGC TGACCGTGAC GTGGCGGACC TATGCCGAGA ACGGCCGGAT GCGGCTGGCC
CTGCGCTGGA ACGAGACGGG AATCGCGGGC CGGCGCGATG CGCAGGCCTC GGAACGGCGC
GGCTACGGAC GCGAGCTGAT CGAGAAGGCG CTGCCCTACG CCCTCGACGC GCGCACGCTC
TACGAATTGG GCGAGACCGC CCTGCACTGC TCCATCGACC TGCCGCTCAC GGAGCAGCGC
AAGACGCTGC GCTAG
|
|---|
| Protein sequence | MGERTNPPAR SPDWGETGRF REFEWAEAAL RASEEKYRTL FQTMGQGFCE LEFVRDAQGR
AVDFRYIELN PAFERLVGVP AAQARGRAGR EVVPKLDPWW VQTYERIAAA GVPARLEHTD
TPLGRWFEVF VYPQANDRLL VLYDDVSERK RAEMALRERE ERQAFLLSLS DAVRTLTDPA
AIQGEACRLI GERLDVGRAY YVAIDEASDL ARVAWDYVRE DVPSLVGEHR IADFAWSVDI
LRRGLCHVVD DTQTSDTVPQ ADRPALAALR IAACMGAPLI KNGSLVGALC VTHSGPRSWT
EGDVGLLRDV AERIWSAVER GRAEADIRRK NAVLEGINRI FRKALTARTE EELGRVCLAV
AEDVTQSAFS FMGEVNHESR CFNELSISDR GWDHFAMDDP AFSKGLPPTG LKLHGLYGRV
LQDGKSLIAN EPGSHPDRIG TPRGHPPLKA FLGVPLKRDG QTVGMIGLGN REGGYRTEDR
EAAEALAPAI LQALLSRRTA DTLRESEERF RTLAELVPSL LWNCDPAGKV VVVNQQWGDY
TGQGPDEIQD GGWLATIHPD EMAETERVFT EAFATGRSVE RQQRIRRRDG AYRWFLVRHA
PARDADGRIT RWFGAATDIH DQHLASQNLR AEEARQAFLL DLADRLQGQM DPQAALHTVV
EALGRHLGAG RVGYARLSAD GERVERQVGY HAETEARLGP LPITAFGRAI LDRLRDGETI
IVDDAAAVTT PGVWRQGAVG SFVAVPLVRD GRVRTVLYLT HREPRTWTRS ETTLIEEVAA
RTWEAAERAQ AETELRASEA RQRALVEGIP QLIWRAGIDG AWSWASPQWC RYTGQTEAES
RGFGWLDAVH PEDRDRAQEV WGGAAAAETL TFDYRIRHAP EGRYRWFQSR ALPLREGSEI
IEWLGTSTDI DDLRRLQEQQ DVMVAELQHR TRNLITVVRS LAEQTMARSA SMEVFRRQFY
DRLSVLSRVQ GLLSRSGIEP ITLHALISTE LDALGAGEAA DRIYLEGPSV RLRKAMVQTL
ALALHELATN ARKYGALAGN AGRLTVTWRT YAENGRMRLA LRWNETGIAG RRDAQASERR
GYGRELIEKA LPYALDARTL YELGETALHC SIDLPLTEQR KTLR
|
|---|
| |