| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0678 |
|---|
| Symbol | |
|---|
| ID | 6312249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 722975 |
|---|
| End bp | 723847 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649386 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001923391 |
|---|
| Protein GI | 188579946 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.149422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.525189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCA ACCTGAACCT CGATCAGATC CGCTCCTTCC TGGCCGTCCT CGACAGCGGC
AGCTTCACGG CCGCCGCGGG GGTGCTGGGC GTGCGGCAAT CCACGGTCAG CGGGCACATC
GCGCGGCTCG AACAGGCGCT GGAGCGCCCC CTCCTCATGC GGGACACGCA CCGGGTCGCC
GCGACGCCGG ACGGACAGGC CATGATCGGC TTCGCCCGCG ACCTGCTGGA GGCGCACGAC
CGGCTTCGCG CCTTCTTCTC GCCGAGCGGC CTGCGCGGTC GCATCCGCCT CGGCGTCTCC
GAAGACTACA CCCTGTCGGC CCTGGCCCAG GTGCTCGCGC GTTTCGCGGA TCGCCATCCC
TCCGTGGACC TCCAGTTGAC GGTCGGGCTC AGCCGGACCC TCTACCAGGG CTACGATGCG
GGCGAACTCG ACGTGATCTT CTGCAAGCGC CGACGCGGCG ATCCGCGCGG CGAGTTGGCC
TGGGCGGAGG AACTGATCTG GGCCGGCCGC CCCGGCTCGC TCCCCGATCC GGCGCTGCCG
GTGCCCCTGA TCCTCTATCC GCCGCCCTCA ATGACGCGTG CGCTGGCGCT CGATGCGCTC
GAAGCGGCCG GGCGCTCCTG GCGGATCGCC TGCACCAGCG GCAGCCTGAT GGGGCTGCGC
GCCGCCGTCG AAGCGGGTCT GGGCTTCGCG CCGCACTCGG CCAGGGTCAT GCCGCCGGGA
CTGGCCCCGA TCCCGAAATC GGCTGGGCTG CCTGCAATCG GCGAGGTCGA GTTCGTCGTG
CTCGGCTCAG GCCACCAGCA TCCGATCGCG ACGGCGTTGA AGGAGACGAT CCTGGCCAGC
ACGGCGGAGC TTCAGGCCGT GCCCGAGCCG TGA
|
|---|
| Protein sequence | MMSNLNLDQI RSFLAVLDSG SFTAAAGVLG VRQSTVSGHI ARLEQALERP LLMRDTHRVA
ATPDGQAMIG FARDLLEAHD RLRAFFSPSG LRGRIRLGVS EDYTLSALAQ VLARFADRHP
SVDLQLTVGL SRTLYQGYDA GELDVIFCKR RRGDPRGELA WAEELIWAGR PGSLPDPALP
VPLILYPPPS MTRALALDAL EAAGRSWRIA CTSGSLMGLR AAVEAGLGFA PHSARVMPPG
LAPIPKSAGL PAIGEVEFVV LGSGHQHPIA TALKETILAS TAELQAVPEP
|
|---|
| |