Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0644 |
Symbol | |
ID | 6312638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 686481 |
End bp | 688421 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642649352 |
Product | ABC transporter related |
Protein accession | YP_001923357 |
Protein GI | 188579912 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.601366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCTGCGG CATGGGCGCG GGGTTGGCTC GGCGTCAAGG AGGCTTACCT GAGCCTCTCC TTCCTCGCAC GGTCCCCGAA AATCATGTTC CTCGACTGGC TCGAGCGCCG CATCGATCCG TTCGCGCCCT TCGATGACCG GCGCATGCCG CCCAAGACCG TGCTCGGTTT CGCCGGGTTC TACCTGCGGC CGATCCGCCG GGCGCTGCTG CTGCTGTTCG TCATCGCCGT GATCGCGGGC GGGATCGAGG CTTCGCTCTA CCTGCTGATG CGCTGGTTCA TCGACCTGAT GAGCGAGGCC AACCGCGCCA CCGTGCTCTC GGACAATGCC GTGCCGCTGA CGCTCGCCGC GCTGCTGCTG CTCGTGGTGC GCCCATTGGC GGCCTTCCTG CACGAACTCG CCTCGAACCA GCTCATCGTG CCGCAATCGA CCAACCAGAT CCGCTGGCGC ACCCATCTCT ACACGCTCGG CCATTCGCTC TCGTACTTCC AGGCGGATTT CGCTGGGCGG CTCGCCAACC GCACGGTGCA GGTCGGGCCG GCGGTGCGCG AACTCGCGGT CGTGTTCATC GACACGCTGC TCTACGTGGC GATCTACGCG GTTACCGCGA TCGGGCTGTT CTCCTCGATC TCGGCGTGGC TGGCGCTCCC CGTCGTCGTC TGGGTCGCGG CCTATGCCGG GCTGACGGCG TGGTTCGTGC CGCGCGCCCG CACGCGCTCG CACCTGACCG CCGAGACCCG CTCGACCCTG ATCGGCCGGG TGGTCGACAG CTACACCAAC ATCCTCACCG TCAAGCTCTT CGCCCGCGAC CGCGAGGAGC GGGCCGCGGT GCGCGACGCG GTCGAGACCC ACACCAAGGC CTATCTCCAC CAGTTCCGGC TCACCACGCT GACGACGAGC CTCCTGGCGG GGCTCAACAG CCTGCTGCTC TTCACCACGG CCGCCGTCTG CTTCGCCCTG TGGCAGCGCG GCGCGATGAC GACCGGCGAG GCCTCGGCTG GGCTCGCGCT GATCCTGCGG CTGATGGCGA TGTCGGGCTG GGTGATGCAG ACCGTGCGCG GCGTGTTCGA GAATGTCGGG GTGATCCAGG AGAGCATGCA GACCATCGCC CGGCCGCACG GCCTCACCGA CGCGCCCGAC GCGAAGGTGC TGCAGGTGAG CGGCGGCGAC ATCCGCTTCG AGAACGTGGA TTTCCACTAC GGCCGGGGCG ATGCCAGCAT CATCGAGAAC CTGTCCTTCC ACATCCGTCC GGGCGAGAAG GTCGGCCTCG TCGGCGTCAG CGGCGCGGGC AAGAGCACGA TCACGTCGCT GCTGCTGCGC CTGCACGACG TCGAGGGCGG GCGCATCCTC GTGGACGGGC AGGACATCGC CGGGGTGACG CAGGATTCCC TGCGCGAGGC CATCGCCATG GTCAGCCAGG ACACCTCGCT CCTGCACCGC TCGATCCGCG ACAACATCGG CTACGGCCGG CCGGACGCCT CGGATGCCGA GATCGAGCGG GCGGCGCGGC TGGCGCATGC CCACGACTTC ATCCTCGACC TCGTGGACCA CAAGGGCCGC CGCGGCTACG ACGCCCATGT CGGCGAGCGC GGCGTGAAGC TCTCGGGCGG ACAGCGCCAG CGCATCGCCA TCGCCCGCGT CATCCTCAAG GATGCGCCGA TCCTGATCCT CGACGAGGCG ACGAGCGCGC TGGACAGCCA GGTCGAGGCG GCGATCCAGG AGGCGCTCGA CACGCTGATG GGCGGCAAGA CCGTGCTCGC CATCGCCCAC CGCCTCTCGA CCATCGCCGC CCTCGACCGG CTGATCGTGA TCGACCGCGG CCGGATCGTG GAGGAGGGTA CGCATGCCGA ACTGATCCGC CGGGGCGGCC TCTACGCCGA CCTGTGGCGG CGTCAGTCCG GCGGCTTCCT GGGGGATCGG GCGCCGGCTC CGGCCTCGTG A
|
Protein sequence | MPAAWARGWL GVKEAYLSLS FLARSPKIMF LDWLERRIDP FAPFDDRRMP PKTVLGFAGF YLRPIRRALL LLFVIAVIAG GIEASLYLLM RWFIDLMSEA NRATVLSDNA VPLTLAALLL LVVRPLAAFL HELASNQLIV PQSTNQIRWR THLYTLGHSL SYFQADFAGR LANRTVQVGP AVRELAVVFI DTLLYVAIYA VTAIGLFSSI SAWLALPVVV WVAAYAGLTA WFVPRARTRS HLTAETRSTL IGRVVDSYTN ILTVKLFARD REERAAVRDA VETHTKAYLH QFRLTTLTTS LLAGLNSLLL FTTAAVCFAL WQRGAMTTGE ASAGLALILR LMAMSGWVMQ TVRGVFENVG VIQESMQTIA RPHGLTDAPD AKVLQVSGGD IRFENVDFHY GRGDASIIEN LSFHIRPGEK VGLVGVSGAG KSTITSLLLR LHDVEGGRIL VDGQDIAGVT QDSLREAIAM VSQDTSLLHR SIRDNIGYGR PDASDAEIER AARLAHAHDF ILDLVDHKGR RGYDAHVGER GVKLSGGQRQ RIAIARVILK DAPILILDEA TSALDSQVEA AIQEALDTLM GGKTVLAIAH RLSTIAALDR LIVIDRGRIV EEGTHAELIR RGGLYADLWR RQSGGFLGDR APAPAS
|
| |