Gene Mpop_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0644 
Symbol 
ID6312638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp686481 
End bp688421 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content69% 
IMG OID642649352 
ProductABC transporter related 
Protein accessionYP_001923357 
Protein GI188579912 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.601366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGCGG CATGGGCGCG GGGTTGGCTC GGCGTCAAGG AGGCTTACCT GAGCCTCTCC 
TTCCTCGCAC GGTCCCCGAA AATCATGTTC CTCGACTGGC TCGAGCGCCG CATCGATCCG
TTCGCGCCCT TCGATGACCG GCGCATGCCG CCCAAGACCG TGCTCGGTTT CGCCGGGTTC
TACCTGCGGC CGATCCGCCG GGCGCTGCTG CTGCTGTTCG TCATCGCCGT GATCGCGGGC
GGGATCGAGG CTTCGCTCTA CCTGCTGATG CGCTGGTTCA TCGACCTGAT GAGCGAGGCC
AACCGCGCCA CCGTGCTCTC GGACAATGCC GTGCCGCTGA CGCTCGCCGC GCTGCTGCTG
CTCGTGGTGC GCCCATTGGC GGCCTTCCTG CACGAACTCG CCTCGAACCA GCTCATCGTG
CCGCAATCGA CCAACCAGAT CCGCTGGCGC ACCCATCTCT ACACGCTCGG CCATTCGCTC
TCGTACTTCC AGGCGGATTT CGCTGGGCGG CTCGCCAACC GCACGGTGCA GGTCGGGCCG
GCGGTGCGCG AACTCGCGGT CGTGTTCATC GACACGCTGC TCTACGTGGC GATCTACGCG
GTTACCGCGA TCGGGCTGTT CTCCTCGATC TCGGCGTGGC TGGCGCTCCC CGTCGTCGTC
TGGGTCGCGG CCTATGCCGG GCTGACGGCG TGGTTCGTGC CGCGCGCCCG CACGCGCTCG
CACCTGACCG CCGAGACCCG CTCGACCCTG ATCGGCCGGG TGGTCGACAG CTACACCAAC
ATCCTCACCG TCAAGCTCTT CGCCCGCGAC CGCGAGGAGC GGGCCGCGGT GCGCGACGCG
GTCGAGACCC ACACCAAGGC CTATCTCCAC CAGTTCCGGC TCACCACGCT GACGACGAGC
CTCCTGGCGG GGCTCAACAG CCTGCTGCTC TTCACCACGG CCGCCGTCTG CTTCGCCCTG
TGGCAGCGCG GCGCGATGAC GACCGGCGAG GCCTCGGCTG GGCTCGCGCT GATCCTGCGG
CTGATGGCGA TGTCGGGCTG GGTGATGCAG ACCGTGCGCG GCGTGTTCGA GAATGTCGGG
GTGATCCAGG AGAGCATGCA GACCATCGCC CGGCCGCACG GCCTCACCGA CGCGCCCGAC
GCGAAGGTGC TGCAGGTGAG CGGCGGCGAC ATCCGCTTCG AGAACGTGGA TTTCCACTAC
GGCCGGGGCG ATGCCAGCAT CATCGAGAAC CTGTCCTTCC ACATCCGTCC GGGCGAGAAG
GTCGGCCTCG TCGGCGTCAG CGGCGCGGGC AAGAGCACGA TCACGTCGCT GCTGCTGCGC
CTGCACGACG TCGAGGGCGG GCGCATCCTC GTGGACGGGC AGGACATCGC CGGGGTGACG
CAGGATTCCC TGCGCGAGGC CATCGCCATG GTCAGCCAGG ACACCTCGCT CCTGCACCGC
TCGATCCGCG ACAACATCGG CTACGGCCGG CCGGACGCCT CGGATGCCGA GATCGAGCGG
GCGGCGCGGC TGGCGCATGC CCACGACTTC ATCCTCGACC TCGTGGACCA CAAGGGCCGC
CGCGGCTACG ACGCCCATGT CGGCGAGCGC GGCGTGAAGC TCTCGGGCGG ACAGCGCCAG
CGCATCGCCA TCGCCCGCGT CATCCTCAAG GATGCGCCGA TCCTGATCCT CGACGAGGCG
ACGAGCGCGC TGGACAGCCA GGTCGAGGCG GCGATCCAGG AGGCGCTCGA CACGCTGATG
GGCGGCAAGA CCGTGCTCGC CATCGCCCAC CGCCTCTCGA CCATCGCCGC CCTCGACCGG
CTGATCGTGA TCGACCGCGG CCGGATCGTG GAGGAGGGTA CGCATGCCGA ACTGATCCGC
CGGGGCGGCC TCTACGCCGA CCTGTGGCGG CGTCAGTCCG GCGGCTTCCT GGGGGATCGG
GCGCCGGCTC CGGCCTCGTG A
 
Protein sequence
MPAAWARGWL GVKEAYLSLS FLARSPKIMF LDWLERRIDP FAPFDDRRMP PKTVLGFAGF 
YLRPIRRALL LLFVIAVIAG GIEASLYLLM RWFIDLMSEA NRATVLSDNA VPLTLAALLL
LVVRPLAAFL HELASNQLIV PQSTNQIRWR THLYTLGHSL SYFQADFAGR LANRTVQVGP
AVRELAVVFI DTLLYVAIYA VTAIGLFSSI SAWLALPVVV WVAAYAGLTA WFVPRARTRS
HLTAETRSTL IGRVVDSYTN ILTVKLFARD REERAAVRDA VETHTKAYLH QFRLTTLTTS
LLAGLNSLLL FTTAAVCFAL WQRGAMTTGE ASAGLALILR LMAMSGWVMQ TVRGVFENVG
VIQESMQTIA RPHGLTDAPD AKVLQVSGGD IRFENVDFHY GRGDASIIEN LSFHIRPGEK
VGLVGVSGAG KSTITSLLLR LHDVEGGRIL VDGQDIAGVT QDSLREAIAM VSQDTSLLHR
SIRDNIGYGR PDASDAEIER AARLAHAHDF ILDLVDHKGR RGYDAHVGER GVKLSGGQRQ
RIAIARVILK DAPILILDEA TSALDSQVEA AIQEALDTLM GGKTVLAIAH RLSTIAALDR
LIVIDRGRIV EEGTHAELIR RGGLYADLWR RQSGGFLGDR APAPAS