| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0569 |
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| Symbol | |
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| ID | 6311778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 617552 |
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| End bp | 618796 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642649277 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001923282 |
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| Protein GI | 188579837 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.120563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.13441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG CCTATGTCTG GTACGAGACG GCGCGCGCGA TGCTGACGCC GGCCCGGCTC
GCGGCGGATG CCGCACGGCA CAGTCTCGGA AATCCGGGCA ACCCGCTCGC CTACGGTCCC
TATGCCCGCT CGACGGCCGC CGCATTGGAG ATGTTCGAGC GCGTGACCCG CCGCTACGGC
AAGCCGGCCT TCGGACTGCC GACGACGGTG ATCGACGGCC AGTCCGTCCC GGTCTCGGAG
CGGGTCGTGT GGGAGCGGCC CTTCGCCCGG GTGATCGCCT TCGACCGGGC GCTGCCCGTC
GGCCCGGCGG AACCGCAACC GAAGCTCCTG ATCGTGGCAC CAATGTCGGG CCATTACGCG
ACGCTCCTGC GCGGCACCGT GGAGGCGATG CTGCCCAATC ACAGGGTCTT CATCACGGAC
TGGTCCGATG CGCGCATGGT GCCGCTGTTC GACGGCCGCT TCGACCTCGA CACGTATATC
GACTACCTGC AGGCGATGTT CCGTGACCTG GGGCCGGACC TGCACGTGAT GGCCGTGTGT
CAGCCCGCCG TGCCGGTCTT CGCCGCGGTG GCGCTGATGG AAGCGGCCGG CTCGGCCGAC
GTGCCGGTCT CGATGACGCT GATGGGCGGG CCGATCGACA CCCGCCGCTC GCCGACCGCG
GTGAACTGCC TCGCGCAGGA GCGCGGCATG GGCTGGTTCG AGAAGAACTG CATCACGGTG
GTGCCGCCGC TCTATCCGGG GGCGATGCGC CGGGTCTATC CCGGCTTCCT GCAGCTCTCG
GGCTTCATGG CGATGAATCT CGACCGGCAC GTCACCGCCC ATACTGATAT GTTCCACCAC
CTCGTGACCG GGGACGGCGA CTCGGCGGAG AAGCACCGCG ACTTCTACGA CGAGTACCTC
GCGGTGATGG ACCTGACGGC GGAGTTCTAC CTGCAGACGG TCCAGACCGT ATTCGTCGAC
CACGCCCTGC CGCGCGGGCG GATGCGCCAT GCCGGCCGGC CGGTCGATCC CTCGGCGATC
CGGCGCTGCG CCATCCTCGC CGTCGAGGGC GAGAACGACG ACATTTCCGG CGTCGGCCAG
ACCAAGGCTG CCCTCGACCT GACGCCGAAC CTGCCGGATT CCCGCAAGGC CTATCACCTG
CAGGACAAGG TGGGCCATTA CGGCGTGTTC AACGGCTCGC GCTTCCGCTC CACCATCGCG
CCGCGCATCG CCCGGTTCGT GCGCGAGATG GAGGCCGGCG CCTGA
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| Protein sequence | MDLAYVWYET ARAMLTPARL AADAARHSLG NPGNPLAYGP YARSTAAALE MFERVTRRYG
KPAFGLPTTV IDGQSVPVSE RVVWERPFAR VIAFDRALPV GPAEPQPKLL IVAPMSGHYA
TLLRGTVEAM LPNHRVFITD WSDARMVPLF DGRFDLDTYI DYLQAMFRDL GPDLHVMAVC
QPAVPVFAAV ALMEAAGSAD VPVSMTLMGG PIDTRRSPTA VNCLAQERGM GWFEKNCITV
VPPLYPGAMR RVYPGFLQLS GFMAMNLDRH VTAHTDMFHH LVTGDGDSAE KHRDFYDEYL
AVMDLTAEFY LQTVQTVFVD HALPRGRMRH AGRPVDPSAI RRCAILAVEG ENDDISGVGQ
TKAALDLTPN LPDSRKAYHL QDKVGHYGVF NGSRFRSTIA PRIARFVREM EAGA
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