| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0482 |
|---|
| Symbol | |
|---|
| ID | 6308762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 514249 |
|---|
| End bp | 515196 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642649183 |
|---|
| Product | Extensin family protein |
|---|
| Protein accession | YP_001923195 |
|---|
| Protein GI | 188579750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTT TCACCCTCGC CGTCCGCTCG ATTGCGTGCT CGGTGACCGC TTGCGTGCTC
GCGCTCGCCC TGTCGCCTGG GCCGGCGCGG TCGGAGCCGG CCAAGCCGCC GCCCGCGACG
GTGCCGCTGC CGCCGCCCCA GCCGCCCGCG CGTCCCGGTG ACCTCCTGCC GCCCGCACCC
CAGGTGACGC CGCTGCCGCC GGAGCGCCCG CCGGAACTCG CCGCCGCTCC TGACAAGGAG
GCCGGTCAGG GAAACGGCCC GAAGCCGGAC GCGCCGCAGC CCGAGCCGGC GAGGGAGATG
CCGAAGGACG CCAAGGAAAC ACCCACCACC CTGCCGGATG CGCCGCTTCC GCCGGAGCGG
CCGCCCGAGC TGTCCGGCGA CTCGGCGCTC GCCCTCAAGG TGTCCGCGCC CGACGACACC
GCCTGCCTGC GCCGGCTGGA ACGGCTCGGT GCCCGGTTCG AGGCCGCGGC TCCGCTCGGC
AACGGCCAGT GCAGCGCGCC GCGCCCGCTG ACCGTGACCA CCCTTGCCGA CGGCGTGGCG
CTGGAGCCGG CCGCCACGCT CACCTGCCGG GCGGCGGAAG CGCTGGCGCG CTGGGCCACC
GAGGTTCAGG TCGCGGCGCA GAAGGAGTTC GGCGACAGCC TGAAGAGCCT CGCCATCGGC
GGAACCTATG TCTGCCGCGG GCAGAACCAC GACACGGACG CCAAGCTCAG CGAGCACAGC
TTCGCCAACG CCATCGACGT GATGGGCTAC GGCTTCGCCA AGCGCGCGAG CCTCAAGGTG
ACCGCCGCGC CGGACGGCTC GCCGGAGGCG GCGTTCCTGG CATCCGTGCG CACCGGCGCC
TGCGGTTTCT TCCGCACGGT GCTGGGGCCG GGCAGCGACG CGGCGCACGG CAACCACCTG
CATCTCGACC TGCGCGAGCG CAACGCCGGG CACCGCCTCT GCCAATAG
|
|---|
| Protein sequence | MKSFTLAVRS IACSVTACVL ALALSPGPAR SEPAKPPPAT VPLPPPQPPA RPGDLLPPAP
QVTPLPPERP PELAAAPDKE AGQGNGPKPD APQPEPAREM PKDAKETPTT LPDAPLPPER
PPELSGDSAL ALKVSAPDDT ACLRRLERLG ARFEAAAPLG NGQCSAPRPL TVTTLADGVA
LEPAATLTCR AAEALARWAT EVQVAAQKEF GDSLKSLAIG GTYVCRGQNH DTDAKLSEHS
FANAIDVMGY GFAKRASLKV TAAPDGSPEA AFLASVRTGA CGFFRTVLGP GSDAAHGNHL
HLDLRERNAG HRLCQ
|
|---|
| |