Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0360 |
Symbol | |
ID | 6309192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 382677 |
End bp | 383324 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642649060 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001923073 |
Protein GI | 188579628 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCAA GCCCCGCCCT CATCGACGAG CCCCCGAGCG AGACGCCCTC CCCGCGTCAG CAGGCGGTGC TGGACGCCGC CCTGGCGCTG ATGGTCGAGG GCAACGACCC GCTCACCATG GATGCGGTGG CGCGCCGGGC GAGCTGCTCG AAGGAAACGC TCTACAAGTG GTTCGGCGAC CGGGACGGCC TCCTGACCGC GACGGTGCGC TGGCAGGCCT CGCGGGTGCA TGCCGGCCGT TACGAGGTCA GCGGCCTCGA TGCGACGACC CTGCGTGAAA ACCTCCTCGA CTTCGCCGAG AGCTGGCTCG CGGTGATCGG CAGCCGCACT TCGGTGGCGC TCAACCGCAT CGCCATCGCC GAGGCGGGTT CGCGCCGGAG CAACCTCGGC GGCATCGTCC TGGCGAATGG TCGCTTCGCC ATCGGCGAGC GAGTGAAGCC GGTGCTGGAG GCCGGCCGCG CGGCGGGTCT CCTCGCCTTC GAGGACAGCG AGGCCGCGTT CCGGACCTTC TTCGGTCTGG TGGGCCGCGA TATCCAGATC AGACTTCTCC TCGGCGACGC GCTCGATCTC GACGCCGCCG GGATCCGGAG CGACGCGGCC CGTGCCGTCG AGCAGTTCCT GGCCCTCTAC GGCCGGGCGA AACCCTGA
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Protein sequence | MQPSPALIDE PPSETPSPRQ QAVLDAALAL MVEGNDPLTM DAVARRASCS KETLYKWFGD RDGLLTATVR WQASRVHAGR YEVSGLDATT LRENLLDFAE SWLAVIGSRT SVALNRIAIA EAGSRRSNLG GIVLANGRFA IGERVKPVLE AGRAAGLLAF EDSEAAFRTF FGLVGRDIQI RLLLGDALDL DAAGIRSDAA RAVEQFLALY GRAKP
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