Gene Mpop_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0360 
Symbol 
ID6309192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp382677 
End bp383324 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID642649060 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001923073 
Protein GI188579628 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAA GCCCCGCCCT CATCGACGAG CCCCCGAGCG AGACGCCCTC CCCGCGTCAG 
CAGGCGGTGC TGGACGCCGC CCTGGCGCTG ATGGTCGAGG GCAACGACCC GCTCACCATG
GATGCGGTGG CGCGCCGGGC GAGCTGCTCG AAGGAAACGC TCTACAAGTG GTTCGGCGAC
CGGGACGGCC TCCTGACCGC GACGGTGCGC TGGCAGGCCT CGCGGGTGCA TGCCGGCCGT
TACGAGGTCA GCGGCCTCGA TGCGACGACC CTGCGTGAAA ACCTCCTCGA CTTCGCCGAG
AGCTGGCTCG CGGTGATCGG CAGCCGCACT TCGGTGGCGC TCAACCGCAT CGCCATCGCC
GAGGCGGGTT CGCGCCGGAG CAACCTCGGC GGCATCGTCC TGGCGAATGG TCGCTTCGCC
ATCGGCGAGC GAGTGAAGCC GGTGCTGGAG GCCGGCCGCG CGGCGGGTCT CCTCGCCTTC
GAGGACAGCG AGGCCGCGTT CCGGACCTTC TTCGGTCTGG TGGGCCGCGA TATCCAGATC
AGACTTCTCC TCGGCGACGC GCTCGATCTC GACGCCGCCG GGATCCGGAG CGACGCGGCC
CGTGCCGTCG AGCAGTTCCT GGCCCTCTAC GGCCGGGCGA AACCCTGA
 
Protein sequence
MQPSPALIDE PPSETPSPRQ QAVLDAALAL MVEGNDPLTM DAVARRASCS KETLYKWFGD 
RDGLLTATVR WQASRVHAGR YEVSGLDATT LRENLLDFAE SWLAVIGSRT SVALNRIAIA
EAGSRRSNLG GIVLANGRFA IGERVKPVLE AGRAAGLLAF EDSEAAFRTF FGLVGRDIQI
RLLLGDALDL DAAGIRSDAA RAVEQFLALY GRAKP