Gene Mpop_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0320 
Symbol 
ID6312623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp344462 
End bp345031 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content70% 
IMG OID642649021 
Productintracellular protease, PfpI family 
Protein accessionYP_001923036 
Protein GI188579591 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC AGGGCAAGAC CATCGCCATC CTGATCGCCC CCCGTGGGAC GGAAGAGCCC 
GAGTTCACCA AGCCCCGCGA GGCGCTGCTC GCGGCCGGGG CGACGGTCAC GGTGGTCGGG
CTTGAGGCCG GCGAGGCCGA GACGGTCAAC AACGACCTCG ACCCCGCCGG GAAGTACCCG
GTCGACAAGG CCATCGACGG CGTGTCCGCC TCCGACTTCG ACGGGCTCGT CATCCCCGGC
GGCAGCGTCG GGGCCGACAA GCTCCGCGGC AGCGAGCCCG TGGTCAAGTT CGTGCGGGAC
TTCTTCCAGC AGGCCAAGCC GGTCGGCGTC ATCTGCCACG GGCCCTGGAC CCTGGTCGAG
GCCGACGTCG TGAAGGGGCG CAAGCTGACC TCGTTCCCGA CCGTGAAGAC CGACATCCGC
AACGCGGGCG GGGAATGGGT CGACGCGGAG GTGGTGGTCG ACAAGGGCCT CGTCACCAGC
CGCAACCCGA AGGACCTGCC GGCCTTCTGC GCCAAGATCG TCGAGGAGTT CGCCGAGGGA
CGCCATCCGG ACCAGGCCCG CAGCGCCTGA
 
Protein sequence
MTLQGKTIAI LIAPRGTEEP EFTKPREALL AAGATVTVVG LEAGEAETVN NDLDPAGKYP 
VDKAIDGVSA SDFDGLVIPG GSVGADKLRG SEPVVKFVRD FFQQAKPVGV ICHGPWTLVE
ADVVKGRKLT SFPTVKTDIR NAGGEWVDAE VVVDKGLVTS RNPKDLPAFC AKIVEEFAEG
RHPDQARSA