Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0320 |
Symbol | |
ID | 6312623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 344462 |
End bp | 345031 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642649021 |
Product | intracellular protease, PfpI family |
Protein accession | YP_001923036 |
Protein GI | 188579591 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTC AGGGCAAGAC CATCGCCATC CTGATCGCCC CCCGTGGGAC GGAAGAGCCC GAGTTCACCA AGCCCCGCGA GGCGCTGCTC GCGGCCGGGG CGACGGTCAC GGTGGTCGGG CTTGAGGCCG GCGAGGCCGA GACGGTCAAC AACGACCTCG ACCCCGCCGG GAAGTACCCG GTCGACAAGG CCATCGACGG CGTGTCCGCC TCCGACTTCG ACGGGCTCGT CATCCCCGGC GGCAGCGTCG GGGCCGACAA GCTCCGCGGC AGCGAGCCCG TGGTCAAGTT CGTGCGGGAC TTCTTCCAGC AGGCCAAGCC GGTCGGCGTC ATCTGCCACG GGCCCTGGAC CCTGGTCGAG GCCGACGTCG TGAAGGGGCG CAAGCTGACC TCGTTCCCGA CCGTGAAGAC CGACATCCGC AACGCGGGCG GGGAATGGGT CGACGCGGAG GTGGTGGTCG ACAAGGGCCT CGTCACCAGC CGCAACCCGA AGGACCTGCC GGCCTTCTGC GCCAAGATCG TCGAGGAGTT CGCCGAGGGA CGCCATCCGG ACCAGGCCCG CAGCGCCTGA
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Protein sequence | MTLQGKTIAI LIAPRGTEEP EFTKPREALL AAGATVTVVG LEAGEAETVN NDLDPAGKYP VDKAIDGVSA SDFDGLVIPG GSVGADKLRG SEPVVKFVRD FFQQAKPVGV ICHGPWTLVE ADVVKGRKLT SFPTVKTDIR NAGGEWVDAE VVVDKGLVTS RNPKDLPAFC AKIVEEFAEG RHPDQARSA
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