Gene Mpop_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0275 
Symbol 
ID6313229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp292149 
End bp293897 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content70% 
IMG OID642648980 
Producthypothetical protein 
Protein accessionYP_001922995 
Protein GI188579550 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACAGC CTACCCTCAC GTCTGCGCCC GAGCACCGCC ATGGCCGGCT CGTCCGCGTG 
TCGAGCGTCG GTCTTGCCTC GGTTCTGGCG ATCCTGATCG GTACCTCGGT TCTTCCGCCC
CTGGTGGCGG ACCAATCCGA TCGCGCGGTG GTCAACGCCC CGGTCACCCT GCTCACGGCG
CCGATCGCGG GCGATATCGG GGCGATCCCG GTCGCGGCCG GGGACAGCGT CGATCGCGGT
TCGCTGGTGG CCCAGATCAC CAACGACCGC CTGGACCGCG CCACGGCGAT CCAGCTTGCC
GGGCGGGTTT CCGAATTGCG GGAGCGCGCG CTGGCCGCCG AGAACAAGCG AACCTCGAAC
GAGGCCTATC TCGCGGCTCT CGAACGAGCG ATCCGGGATC AGTCCGCACA GATGACCCAG
GTTCTGCGCG CGCAGGTGGA GGAGCTCAGA GCCAAGATCG CCTCGGCCAA CGCGTCGGGC
GAGGAGAAGC GCGTGCTGAT GGAGCGTCAG GTCGGCATGG TCGCCCGCGA CGTGGCGAGC
CCCGACATGG TGAAGTCGAC GACGCAAGCC TTCAACGCCG CGATTCAGGA GAAGAAGGCA
GCGGAAGCCA AGCTCAATCA GAAGACGGTC CAGCTCGATG GACTGGCGCG CGGACTGTTC
CTAGGCGACG AACTGCGCAG CCTCGCCGAC CTGTCGCAGA AGCAGCTCTC GATCACCTAT
GACACGCAGC GCCTCGCGAT CGAGGAGAAG GAGCTGAAGG CCGCGATGGT CGATCAGCAG
GCCTTGCTGA CGCGGGAGAA CCAGCGCCTC GACCGGTTGA CGACCTCCGA GATCAAGGCG
TCGGCCAAGG GTGTCGTCTA CAACGTCAAC GCGACGACCG GGCGGCATGT CGGCGCCGGC
GACAGTCTCG CCTCCGTCGT GGATTGCGAG CGCAGCTTCG TCGTCGCCAT CTTCTCCTAC
CGCCAGGGCC AGAACCTGCA GGTGGGAAGC GCGGTGACCA TCTCCGGTGG ATCCGTCGGG
CCTCGCCGAG GCATCGTGAC CGAGATCCTG CCCAAGACCA GCGACACGGT CGACGCGACC
TACGCGGTGC CATTCCCGCA GACGGAGCGG CGCGAGCTCT ACGTCCTGGT CAAGCCCGAG
CCGTTCCCGG CTGGCGCCGC GGTATCCGAC AGCCCCGTCG AGGCGGCGTG CGGCGTCGGG
CGCTGGGTGA CGGTCACGCG GGAATCCGGC TGGGTGCCGT CGACCTCCGT CGTCTGGCGC
GATCTCGGCG ACGGCGCGGG CGGCCTCGTG ACGAAGGTCG CGGCCGCCGC ACCCGATCTC
GCGCAAACCG TGGCCGATCA CACCCGGTCC ATGGTCTCCT CGGCGAGCGA TGTTCTGAAA
CAGGTCGTCG CCGCCGGGGC GGAGGTCGTT GGCCCTTCGA AGGCCGGCCA CGACGTCCCG
GTGCGACCGG AGACGGGCAA GCCTCCGGCC AGCGCAGCCG TCGACGGGGA GCGGTCCGCG
ACCCAATCGG CGGCCGTCGC GCCCGCTCTC TCCCCGGAGG GGACGGCCGA TGCGCCCGTG
GTGTCCGGCG AGACACCCGC GGCCGATCGC GTGGCCCCGG TTCCGCCCTT GCGCATGGGG
CCGCAGCCCG CCGATATCAC GCCCGAGCGC CGCATCTCGA TGCCGCCGCT CCCACCGGCT
CGGCCGCGCT TGTTCCAGAG CGAGGCTCCG AAGCAGACCG GTCGCACGGC CCAGGAGGCA
CGCAGCTGA
 
Protein sequence
MSQPTLTSAP EHRHGRLVRV SSVGLASVLA ILIGTSVLPP LVADQSDRAV VNAPVTLLTA 
PIAGDIGAIP VAAGDSVDRG SLVAQITNDR LDRATAIQLA GRVSELRERA LAAENKRTSN
EAYLAALERA IRDQSAQMTQ VLRAQVEELR AKIASANASG EEKRVLMERQ VGMVARDVAS
PDMVKSTTQA FNAAIQEKKA AEAKLNQKTV QLDGLARGLF LGDELRSLAD LSQKQLSITY
DTQRLAIEEK ELKAAMVDQQ ALLTRENQRL DRLTTSEIKA SAKGVVYNVN ATTGRHVGAG
DSLASVVDCE RSFVVAIFSY RQGQNLQVGS AVTISGGSVG PRRGIVTEIL PKTSDTVDAT
YAVPFPQTER RELYVLVKPE PFPAGAAVSD SPVEAACGVG RWVTVTRESG WVPSTSVVWR
DLGDGAGGLV TKVAAAAPDL AQTVADHTRS MVSSASDVLK QVVAAGAEVV GPSKAGHDVP
VRPETGKPPA SAAVDGERSA TQSAAVAPAL SPEGTADAPV VSGETPAADR VAPVPPLRMG
PQPADITPER RISMPPLPPA RPRLFQSEAP KQTGRTAQEA RS