| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0275 |
|---|
| Symbol | |
|---|
| ID | 6313229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 292149 |
|---|
| End bp | 293897 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642648980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001922995 |
|---|
| Protein GI | 188579550 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCACAGC CTACCCTCAC GTCTGCGCCC GAGCACCGCC ATGGCCGGCT CGTCCGCGTG
TCGAGCGTCG GTCTTGCCTC GGTTCTGGCG ATCCTGATCG GTACCTCGGT TCTTCCGCCC
CTGGTGGCGG ACCAATCCGA TCGCGCGGTG GTCAACGCCC CGGTCACCCT GCTCACGGCG
CCGATCGCGG GCGATATCGG GGCGATCCCG GTCGCGGCCG GGGACAGCGT CGATCGCGGT
TCGCTGGTGG CCCAGATCAC CAACGACCGC CTGGACCGCG CCACGGCGAT CCAGCTTGCC
GGGCGGGTTT CCGAATTGCG GGAGCGCGCG CTGGCCGCCG AGAACAAGCG AACCTCGAAC
GAGGCCTATC TCGCGGCTCT CGAACGAGCG ATCCGGGATC AGTCCGCACA GATGACCCAG
GTTCTGCGCG CGCAGGTGGA GGAGCTCAGA GCCAAGATCG CCTCGGCCAA CGCGTCGGGC
GAGGAGAAGC GCGTGCTGAT GGAGCGTCAG GTCGGCATGG TCGCCCGCGA CGTGGCGAGC
CCCGACATGG TGAAGTCGAC GACGCAAGCC TTCAACGCCG CGATTCAGGA GAAGAAGGCA
GCGGAAGCCA AGCTCAATCA GAAGACGGTC CAGCTCGATG GACTGGCGCG CGGACTGTTC
CTAGGCGACG AACTGCGCAG CCTCGCCGAC CTGTCGCAGA AGCAGCTCTC GATCACCTAT
GACACGCAGC GCCTCGCGAT CGAGGAGAAG GAGCTGAAGG CCGCGATGGT CGATCAGCAG
GCCTTGCTGA CGCGGGAGAA CCAGCGCCTC GACCGGTTGA CGACCTCCGA GATCAAGGCG
TCGGCCAAGG GTGTCGTCTA CAACGTCAAC GCGACGACCG GGCGGCATGT CGGCGCCGGC
GACAGTCTCG CCTCCGTCGT GGATTGCGAG CGCAGCTTCG TCGTCGCCAT CTTCTCCTAC
CGCCAGGGCC AGAACCTGCA GGTGGGAAGC GCGGTGACCA TCTCCGGTGG ATCCGTCGGG
CCTCGCCGAG GCATCGTGAC CGAGATCCTG CCCAAGACCA GCGACACGGT CGACGCGACC
TACGCGGTGC CATTCCCGCA GACGGAGCGG CGCGAGCTCT ACGTCCTGGT CAAGCCCGAG
CCGTTCCCGG CTGGCGCCGC GGTATCCGAC AGCCCCGTCG AGGCGGCGTG CGGCGTCGGG
CGCTGGGTGA CGGTCACGCG GGAATCCGGC TGGGTGCCGT CGACCTCCGT CGTCTGGCGC
GATCTCGGCG ACGGCGCGGG CGGCCTCGTG ACGAAGGTCG CGGCCGCCGC ACCCGATCTC
GCGCAAACCG TGGCCGATCA CACCCGGTCC ATGGTCTCCT CGGCGAGCGA TGTTCTGAAA
CAGGTCGTCG CCGCCGGGGC GGAGGTCGTT GGCCCTTCGA AGGCCGGCCA CGACGTCCCG
GTGCGACCGG AGACGGGCAA GCCTCCGGCC AGCGCAGCCG TCGACGGGGA GCGGTCCGCG
ACCCAATCGG CGGCCGTCGC GCCCGCTCTC TCCCCGGAGG GGACGGCCGA TGCGCCCGTG
GTGTCCGGCG AGACACCCGC GGCCGATCGC GTGGCCCCGG TTCCGCCCTT GCGCATGGGG
CCGCAGCCCG CCGATATCAC GCCCGAGCGC CGCATCTCGA TGCCGCCGCT CCCACCGGCT
CGGCCGCGCT TGTTCCAGAG CGAGGCTCCG AAGCAGACCG GTCGCACGGC CCAGGAGGCA
CGCAGCTGA
|
|---|
| Protein sequence | MSQPTLTSAP EHRHGRLVRV SSVGLASVLA ILIGTSVLPP LVADQSDRAV VNAPVTLLTA
PIAGDIGAIP VAAGDSVDRG SLVAQITNDR LDRATAIQLA GRVSELRERA LAAENKRTSN
EAYLAALERA IRDQSAQMTQ VLRAQVEELR AKIASANASG EEKRVLMERQ VGMVARDVAS
PDMVKSTTQA FNAAIQEKKA AEAKLNQKTV QLDGLARGLF LGDELRSLAD LSQKQLSITY
DTQRLAIEEK ELKAAMVDQQ ALLTRENQRL DRLTTSEIKA SAKGVVYNVN ATTGRHVGAG
DSLASVVDCE RSFVVAIFSY RQGQNLQVGS AVTISGGSVG PRRGIVTEIL PKTSDTVDAT
YAVPFPQTER RELYVLVKPE PFPAGAAVSD SPVEAACGVG RWVTVTRESG WVPSTSVVWR
DLGDGAGGLV TKVAAAAPDL AQTVADHTRS MVSSASDVLK QVVAAGAEVV GPSKAGHDVP
VRPETGKPPA SAAVDGERSA TQSAAVAPAL SPEGTADAPV VSGETPAADR VAPVPPLRMG
PQPADITPER RISMPPLPPA RPRLFQSEAP KQTGRTAQEA RS
|
|---|
| |