Gene Mpop_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0143 
Symbol 
ID6311355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp144286 
End bp146028 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content74% 
IMG OID642648853 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001922870 
Protein GI188579425 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.314848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.17167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA GCAGCCTCGA CCGCCTCCGC CTCGCCTTCC TGCCGGTCAT GCTGGGCGCT 
CTCGGCGTCC TCGCCGCCAT CGTCACGACG CTCGCCTGGT GGCGGGACGT CATGCCCGTG
CCCGTGACGG TCCTCGCGGT CCTCCTACCC GGCGCGGCCC TCGCCGCCGC CCGCCAGCAC
GGGGCGACGG CCATCACGCG CCACCTCTCC TCGGCTTCCC TGATGATGCT GGTCGGCCTG
CTGGTCCTAG CCTCCTCGGG CACGCACCTC CAGATCGACG TGCATATGGT CTTCTTCGCC
GCCCTCGCGG TTGCGGCGGG CTGGTGCTGC TGGTCCTCCA TCCTCGTGGC GGCCGGCGTC
GTCGCCGTCC ACCACCTCGC GCTGAACGTG CTCTACCCGG CCGCCGTATT CCCGAACGGG
GCCGAGTACC TGCGTGTCGT GCTGCATGCC GTCGTCCTCG TCACCGAGGC CGCCGCCCTG
GTGCTGGCTG CCCGCCAGCT CGCCAAGGCG CTGGCCTCCG CGGAGGCGGC CACCCGGCAG
GCCGCCGACA GCGTGCTGGC GCAGCGCCGC GCCGAGGCGG CGGCCGGCCA GGACCGTAAC
CTGGAGGCCC ACCGCCAGCG CCGGCTCGGC GAGGTCGTCG CCGAGTTCCG CGACGCCCTG
GTCGAGATCG AGCATAAGGT CGAGCGCGAG ACCGGCGGCA TGCGCGAGAC CGCGCTCGCC
CTCAGCGGCG TCGCCGAGCG GTCCAGCCGT CAGGCCGCCG CGTCGGAGGC CACGGCGTCG
GCGACGGCTC AGAACGTGCT CTCCGTGTCC GCGGGCGCCG AGGAACTCAG CGCCTCCATC
TCGGACATCG CCGGCCAGAC CGAGCGGGCG CGCGAGTTCA TCGCGCACAT GACCGAGATC
GCGCGGACTA CGAACGACGA GGTCGAGCAG CTCGCGGTCG TGGCCGACCG GATCGGCACC
GTCACGGGCC TGATCAAGTC GGTCGCCGAC CAGACCAACC TCCTGGCGCT CAACGCCACC
ATCGAGGCGG CGCGCGCCGG CGCGGCCGGC CGGGGCTTCG CGGTGGTCGC CTCGGAGGTG
AAGGCGCTGT CGGGCCAGAC CATGAGGGCG GCCGACGAGA TCGTGTCCCA GGTCGAGGCC
ATCCAGGCCT CGACGCGGCG GACCGTCGGC TCCGTCCACG CGATGGCCTC CGCCACCCAG
GAGGTGAACG CGCTGACGAC GTCCATCGCC GTGTCGGTGG ACCAGCAGCG GGCGGCCACG
CAGGAGATTT CCCGCACGGT GGCGCAGGTC GCCGAAGGCA GTTCGGAGGC GCACGCCGGC
GCGGTGTCGG TCTCGCGGGC CACACAGGAG ACGCGGCGCC ATGCCGACGG CGCCCTGTCC
GCGTCCGAAT CCCTCAAGGT GGTCGCGGCG GACCTCGCGG CGTCCGTGGG CCTGTTCGTA
CAACGGGTCA CGACGGACCT GGAGGAGCGC CGCGGCAACG TGCGCGTCGC GGTCGACGAG
GCGGGCTTCC TGCACGTGGG CGGCCGACGG CACCCGGTGC GCCTCGTCGA GGTGTCCTCC
CACGGCGCCC GCATCGCCGG CGGCCCGCTC CTCGCGCCCG GCGACAAGGT CGAGTTCGAG
ACCGCCGGCG GGGCCCGCAT GCCGGCGACA ATTGCCTGGG GCGAAGGAGG GGCGGCGGGC
CTCGACGTGC GCGTCGGCCT CCGCCACCCG GCCCTCGGCG GGGCAACCGG CTTGGCGGCC
TGA
 
Protein sequence
MTESSLDRLR LAFLPVMLGA LGVLAAIVTT LAWWRDVMPV PVTVLAVLLP GAALAAARQH 
GATAITRHLS SASLMMLVGL LVLASSGTHL QIDVHMVFFA ALAVAAGWCC WSSILVAAGV
VAVHHLALNV LYPAAVFPNG AEYLRVVLHA VVLVTEAAAL VLAARQLAKA LASAEAATRQ
AADSVLAQRR AEAAAGQDRN LEAHRQRRLG EVVAEFRDAL VEIEHKVERE TGGMRETALA
LSGVAERSSR QAAASEATAS ATAQNVLSVS AGAEELSASI SDIAGQTERA REFIAHMTEI
ARTTNDEVEQ LAVVADRIGT VTGLIKSVAD QTNLLALNAT IEAARAGAAG RGFAVVASEV
KALSGQTMRA ADEIVSQVEA IQASTRRTVG SVHAMASATQ EVNALTTSIA VSVDQQRAAT
QEISRTVAQV AEGSSEAHAG AVSVSRATQE TRRHADGALS ASESLKVVAA DLAASVGLFV
QRVTTDLEER RGNVRVAVDE AGFLHVGGRR HPVRLVEVSS HGARIAGGPL LAPGDKVEFE
TAGGARMPAT IAWGEGGAAG LDVRVGLRHP ALGGATGLAA