Gene Mpop_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0138 
Symbol 
ID6311247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp139188 
End bp140336 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content76% 
IMG OID642648848 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001922865 
Protein GI188579420 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.363055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0562136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGG TAACCCCGCT GGCCCTTGCC TACGATGCGG TCGCGGCCGC CCGGCAGGTG 
GCGGCGACGG CGGCCATGCG GGCCGCCGAC CAGGACCGCG ACCAGGGCTT CCCGGCCGAG
GACGTCGCCG ACCTCGCCCG CCTGGGGCTG CTCGCGGCGC CGGTCCCGTC CATGGCTGGG
GGCGCCGGCC TGGGTGAGGA GCCGGGCGCC CGCAGGCTTG CCGCGGTGCT GCGGCTGGTG
GGCTACGGCA GCCTGGCGCT CGGGCGCCTC TACGAGGGGC ACGTCAACGC GCTGCAACTC
GTCGCCCTCT ACGGCGGGCC CGAGCAGCGG GAACGGCTGT TCGCCGACGC CCGCGACGGC
CACCTGTTCG GCGTCTGGAA CACCGAGCCT CCCGAAGGCG GCCTTACCCT GGAGGACGGC
GCCGGCGGCC TACGGCTGGC CGGCGTGAAG ACCTTCGCCT CGGGCGCGGG CTACGTCACC
CGTGCCTTGG TGACGAGCCG GGGCCCGGGT GGGAGCGGGA CCCTGATGCT GGTCGTGCCG
CTGAAGACTG GGACCAGGGC CGACCTGTCG GCGTGGCGGT CCCACGGCAT GCGCGCGTCG
GCCACCGGCA CCCTCGACTT CGCCGGCATC GCGGTGGCGG CGGAGGACAT CCTGGGCGGC
CCGGACGACT ACTTCCGCCA GCCGGATTTC TCGGGAGGCG CGTGGCGCTT CGCGGCGGTC
CAGCTCGGCG GCATCGAGGC CGTGTTCGAC GTTTGGCGGG GGCATCTCGC GGCGACCGGC
CGCGGCGGCG ACCCGCACCA GCTCGCCCGC CTCGGCGAGG GTGCCATCGC GGTTGAGGGA
GCCCGGCTCT GGGTGGAACG CGCCGCTCAG GCGGTCTCCG ATCCCGCCCT GCCGCCTGAG
CGCGTCGTCG CCCTCGTCAA CCTGGCGCGG CTCGCCGTGG AGCGGGCCGG GCTCGACGTG
CTGCAGCTGG CCCAGCGCTC GGTCGGCCTA CAGGGATTCC TACGGCCCCA CGCTCTGGAG
CGGCTGTCGC GCGACCTCGC CACCTACCTG CGCCAGCCCG GACCGGACCG GGCCCTCACC
GCGGCCGCCG AGGAGATCCT TCGCGCCGGC GGCAGGGCTG GGGACCTGTG GGACGGGGCG
GCGGCATGA
 
Protein sequence
MDQVTPLALA YDAVAAARQV AATAAMRAAD QDRDQGFPAE DVADLARLGL LAAPVPSMAG 
GAGLGEEPGA RRLAAVLRLV GYGSLALGRL YEGHVNALQL VALYGGPEQR ERLFADARDG
HLFGVWNTEP PEGGLTLEDG AGGLRLAGVK TFASGAGYVT RALVTSRGPG GSGTLMLVVP
LKTGTRADLS AWRSHGMRAS ATGTLDFAGI AVAAEDILGG PDDYFRQPDF SGGAWRFAAV
QLGGIEAVFD VWRGHLAATG RGGDPHQLAR LGEGAIAVEG ARLWVERAAQ AVSDPALPPE
RVVALVNLAR LAVERAGLDV LQLAQRSVGL QGFLRPHALE RLSRDLATYL RQPGPDRALT
AAAEEILRAG GRAGDLWDGA AA