Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0005 |
Symbol | |
ID | 6309000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5168 |
End bp | 5779 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642648718 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_001922736 |
Protein GI | 188579291 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.610199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.647138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGT CGAGCCTCGC GCTATTCGCT GGCGTCTACG CCGTTGCGGT TGCCTCACCG GGGCCAGGCA TTTTCGCCCT CGTCGCTCGC GTGCTGGCGC GTGGAACCCG CGGCGTCCCT GCCTTCATCG CGGGGTTTCT CGTCGGCGAC CTACTCTGGT TCTCGATCGC AGCGACCGGA TTCGCCCTGC TTGCCCAGAG CTTCGCAGCC CTCTTTATCG GCATCCGATA CCTCGGCGCA GCCTATCTCG CCTACCTTGC GTGGCGGGCG TGGACGGCGC CGGTCGAGCC CATATCGGGT GAGCCAGTGC AAGGCGAGAG CGGCCTTCGA CTCTTCCTTG GGGGTTTGGC GTTGACGCTC GGCAATCCGA AGGTCGTCTT GTTCTTCCTT GCGCTGCTGC CGACCGTGAT CGATCTCGAG CATCTCACGC CGCTTGGAAT GATCGAGATT GCTGCGACCA TCGCCGCCGT TCTTTGCACG ACGCTAACCG TCTATGCCGT TGCCGCAGTC CGGGTTCGAC GTCTCTTCGT TTCGGTCGGC GCACGGCGGG CAGTCAATCG TGGGGCTGGC ACGGTGATGG CTGGAGCAGC CGTCGCCGTC GCGATGCGGT GA
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Protein sequence | MPLSSLALFA GVYAVAVASP GPGIFALVAR VLARGTRGVP AFIAGFLVGD LLWFSIAATG FALLAQSFAA LFIGIRYLGA AYLAYLAWRA WTAPVEPISG EPVQGESGLR LFLGGLALTL GNPKVVLFFL ALLPTVIDLE HLTPLGMIEI AATIAAVLCT TLTVYAVAAV RVRRLFVSVG ARRAVNRGAG TVMAGAAVAV AMR
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