| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0495 |
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| Symbol | |
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| ID | 4787523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | - |
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| Start bp | 443225 |
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| End bp | 445162 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640092924 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_001023502 |
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| Protein GI | 124263032 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGTCC CGGTTGCGCC CGGCGCGCTC GCTCTGCTGA TCGAGGGTGA TCCCGTCACG
ATCGAAGCCT CGGACTATCT GGGCGTGTTC TGCAAGTTCT TTGCGCTTGC TATACAGACC
TGTGAGCGTC AGCGGATCGC CGTCCAGAAC CTCGACGAAG TGCAGGCGCT GCAACGGGTC
GCCACCCGCA TTCTCAAGAG CCACGATCTG AGCGAGATCC TGCTGCTCAT CACGCAGGAG
GCCAAGCAAC TGCTATCGGC GGACATCTGC GGCGTCCTGT TGCGGGAGGA CGACAAGATC
GTCATGCGCC GCTGCGTCGG CAACCGCTCG CCAGAAACGG CGAACCTGCA GATGGGACCC
GGGCAGGGGT TGGCCGGGCT CGTCCTAGCA CACCGCAAGC CAGCTTCGGT CGAGGACTAT
GTCACCAGCG AAGCCATCAG CCGCGACTTC TTCCACCTAG CCGAGGCCGA ACTCGTTCGC
TCGGCGTCGG CGGCCCCTCT GCTCGGACGC GACGACATCA TCGGCGTGCT GGAAGTCTGG
CGTCGTCGAC CCTCGACATT CACGCCACAG GACACGACCC GGCTGACAGC GCTTGCGAAC
CTGACATCGA TCGCCCTAGA GAACGCGGAG CTCTACGCCG GGCAACGCCG CATGGTCGAG
GAGTTGGGGC AGGCGCACGA AGCGCTCAAC CAGCGCTTCG ACGTCGTGCG CAGCGTCTCA
AGCCTCACGC AGACACTCAT GCTGCTGCTG CTCCAAGGCA CCGGATTGAA TGCGATCGTT
TCTACCACGT CCACGACGCT GAAGACGGAC GTGGCCATCA TCGACAGAGA CGGCACACTG
TTGGCATGGA GTGGTAGTGA CCGGGCGCAT GGCCTAGTCG CTGCTGTGGC CGCCGCCGTC
GTCGCGCAAG GCGTCGCCAC CGCGGGGCTG TCGATGACCC AGGGCGGCTT GTCCTGGCGA
GTTCAACCCA TCTTTGTCGA GGGCGAGGCG GTGGCCTGGA TCCTCGGAAC GCTCGAAGAC
GCGCATCGCT CGGAGCTCAT CGAGTTGACA CTCACGCAAG TTGCGGTCAT CGCTGCTTTG
CAGCGGCTGG AACAGCGATC GGCGAGCCGA GCACGATCGG AGTCGATCGA CGCAACGTTG
TGGGATTTGC TGCGCGCGGA TGAGACCGCA CGTGCAGCGG CCATCGACCG CGCGGCAGAT
CTCAAGCTGG ATCTGGAGGG CCCGATGCGG CTCTACCTCT GCGAACTCGG CGCCACGGTT
CCGGGATCTG CGCAGAGCTC GGGCTCTATC CTTCGGCAGA AGATCACACG TGCAGTGGAG
ACCGTACGTG GCGAGAAGGC GCGCGCGATC GCATTGCAGG GCATCTCGAT CGCCGTGTTG
TGTTCCGATC AGGCGCTCGA CGATGCCGAA CGATTTGCTA AGGGTCTCGC AGAAGCCATC
AGCGACGGTC TTGGTGGACG CCAGGTTGTG GTGGGTGGGA GCAGCCGCTG CCACGTTCCC
CGTGCTCTCG CAATCGCATA CCGGGAGGCG CAGATCGCGC TGGATGTCTC ACGGCAGATG
GGCAAGACCG CCTCTGTCGT GTACGACCGT GCAGGCGTAG TCGGCATGTT GCTGAGTCTG
CGCCATGATG TCGGCATGCG GCGATTCCTG GAACTGAACC TTGGTGAGTT GCTGAACGAG
GAACCGAAGC AGCGCGACCT CTTCTTGCAG ACGCTGCGCG TCTACTTCGA CGTGAACTGT
TCACACGAAG CAGCGTCGCA GAGGCTTGGT GTGCACAGAA AGACGGTCGC ACACCGGCTT
GGTCGAATCT CCGATCTGAC GGGCCTGGAT CTCAGTACGC ACGACGACCG GTTGGTCGCG
GACCTTTCGC TGTACGTCTT CCAGATGCTG AACAACGGTA CAGCATCCGG CGATGCAGAG
GATCGGCGCG TCAGGTAG
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| Protein sequence | MFVPVAPGAL ALLIEGDPVT IEASDYLGVF CKFFALAIQT CERQRIAVQN LDEVQALQRV
ATRILKSHDL SEILLLITQE AKQLLSADIC GVLLREDDKI VMRRCVGNRS PETANLQMGP
GQGLAGLVLA HRKPASVEDY VTSEAISRDF FHLAEAELVR SASAAPLLGR DDIIGVLEVW
RRRPSTFTPQ DTTRLTALAN LTSIALENAE LYAGQRRMVE ELGQAHEALN QRFDVVRSVS
SLTQTLMLLL LQGTGLNAIV STTSTTLKTD VAIIDRDGTL LAWSGSDRAH GLVAAVAAAV
VAQGVATAGL SMTQGGLSWR VQPIFVEGEA VAWILGTLED AHRSELIELT LTQVAVIAAL
QRLEQRSASR ARSESIDATL WDLLRADETA RAAAIDRAAD LKLDLEGPMR LYLCELGATV
PGSAQSSGSI LRQKITRAVE TVRGEKARAI ALQGISIAVL CSDQALDDAE RFAKGLAEAI
SDGLGGRQVV VGGSSRCHVP RALAIAYREA QIALDVSRQM GKTASVVYDR AGVVGMLLSL
RHDVGMRRFL ELNLGELLNE EPKQRDLFLQ TLRVYFDVNC SHEAASQRLG VHRKTVAHRL
GRISDLTGLD LSTHDDRLVA DLSLYVFQML NNGTASGDAE DRRVR
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