| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0389 |
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| Symbol | |
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| ID | 4788017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | + |
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| Start bp | 342566 |
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| End bp | 344476 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640092821 |
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| Product | RecG-like helicase |
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| Protein accession | YP_001023399 |
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| Protein GI | 124262929 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0493519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG AAATCGGCCG CCTCTCTCGC CTGGGCTTCT CGTCGCTGCC CGAGTGCCTC
CTGTCGTCCC CGAAGGAGTA CCGGGACTAC CTCGAGCCCA TGCATGTGCT GCCGATTGCG
GACACTGGCA TCAAGGTCTA CATGGTCCTG ACCTTGACCG ATCGCACGTT GTTCGACCGC
ACGAACATGC CCACCAGCAA CTGGAAGCGC GGCTGGCGCC TGGCGATGCG CGGCGTCGAC
GGGCGAGGGC AGGGGGTCGA CATCACCGTC TTCGGCTCCT ACTTCCCCTG GATGGAGTTT
CAGCCTGGCG ACGAGCTCCA CCTGTACGGC CAGGTCACCA CGTTCAAGGG AAAGCTGCAG
ATCGGCAATC CCGATCTCGT CCTTCCCGAG CAGCGCGGCC GCATCGTCCC GATCTACGCC
GGCAAGCCCG GTCAGGTCTC CGGCGACTCG CTGGCCAAGG GCGTCGCCGG CGCGCTGTCG
AGCATCAATG AAGCCGCGTG CATGCTCCTG GCGCAGTCCG GCATGCGCGA GGCCGAGTTC
CGGCGTCGCG CCGGAATGGA GCCGGAGATG CTGCTGGCCA GCTTGCACAC CCCCAAGTCG
ACGCGCGAAG GCGAGATGGC CGCCAAGGTG GCCACGGAGC TTTCGCTGGC TGCCATCCTG
GGTCGCGCCG CCCGAAACCA ATCCGCTGCG CCCGTCACCG AATCTGCGCT GCCGATCGAC
CGCGCCGCCA TCCAGGCGCT GTGCGCCCGC CTGCCCTTCT CCTTGACCGG TGACCAGGCC
AAGGCGATCG ACGAAGTGGT GGGTGATCTG CGTGCGCCTT TCCCGATGCG CCGCCTTCTC
TCTGGTGACG TCGGCACCGG CAAGTCGATC GTCTTCATGG TTCCCGCGGT GGCGGCGTTC
AATGCCGGCG CGCGGGTCGC GATCGTGGTG CCCAACCAGC TGCTGGTCGA GCAGATTGCC
GGCGAGCTCC GCGCCTACTA CCCGGAGATT CCGGTCCAAG AGGTGACCTC CGGCGCCCAG
ATCGGTTCGA GCCTTGTCGT TGGTACCAGC GCCGTGATTC ACGCCGCTCG CAAGCACAAG
CTCGAGTTCG ACTTGGTCAT CGTCGACGAG CAGCACAAGT TCTCGGTCGA GCAGAAGGAC
GCCCTGCGAG TCGCTCGCAC CAACTTCCTC GAAGCGACCG CCACCGCGAT CCCGCGCACG
CTGGCCCTGG TGGGCTTCGG CGGCATGGCA GTCTCGGTGC TGCGCGAGCT GCCGGTGGTG
AAGAAGATCG CCACCCGGAT CGTGGAGAAG GCCGACGGCG CACGCCTGTT CGACTTTGTT
CATGCCCAGA TCGCCGCGGG CGGCCAGGTG GCAGTGATCT ATCCGCTCGC CGAAGACATG
GGTGACGGCG AGCGGGCGTC CGTGGAGGCC GCTTTCGAGC GCTTCAAGGC GCGCTACGGC
GACCGCGCGG GCATGCTCCA CGGGAAATTG TCGGATGACG AGAAGGCCGC CGTAATCAAT
AAAATGAGGG ACGGCGAGTT GAGCTTGCTC GTAAGCTCGA CAGTGATCGA AGTTGGTGTC
ACGCTACCGT CGCTTCGCGC CTTGGTGGTG GTTCACCCGG AACGCTTCGG CGTTTCACAA
CTCCACCAGC TGCGCGGCCG TGTGGCACGA AAGGGTGGGT CAGGTTACTT TTTCCTCTAC
CTGCCCGCGG AGGTAGAAGA TATGGCAATG CAGCGTCTTG AGCTCTTGGT CGAGTGTAGC
GACGGCTTCA CTCTGGCCGA GCGCGACGCT GACCTGCGTG GGTTCGGCAA CGTCGACGCC
GGCGGAGACG CGCAGACGGG GTCCTCCAGG CTGCTCTTCT GGGGCGTGAA TCTGACACGC
CAGGACATTG AACGTGGCGC CGAGCGTCTC GGCCTGTTGG AGGCGGCCTG A
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| Protein sequence | MSKEIGRLSR LGFSSLPECL LSSPKEYRDY LEPMHVLPIA DTGIKVYMVL TLTDRTLFDR
TNMPTSNWKR GWRLAMRGVD GRGQGVDITV FGSYFPWMEF QPGDELHLYG QVTTFKGKLQ
IGNPDLVLPE QRGRIVPIYA GKPGQVSGDS LAKGVAGALS SINEAACMLL AQSGMREAEF
RRRAGMEPEM LLASLHTPKS TREGEMAAKV ATELSLAAIL GRAARNQSAA PVTESALPID
RAAIQALCAR LPFSLTGDQA KAIDEVVGDL RAPFPMRRLL SGDVGTGKSI VFMVPAVAAF
NAGARVAIVV PNQLLVEQIA GELRAYYPEI PVQEVTSGAQ IGSSLVVGTS AVIHAARKHK
LEFDLVIVDE QHKFSVEQKD ALRVARTNFL EATATAIPRT LALVGFGGMA VSVLRELPVV
KKIATRIVEK ADGARLFDFV HAQIAAGGQV AVIYPLAEDM GDGERASVEA AFERFKARYG
DRAGMLHGKL SDDEKAAVIN KMRDGELSLL VSSTVIEVGV TLPSLRALVV VHPERFGVSQ
LHQLRGRVAR KGGSGYFFLY LPAEVEDMAM QRLELLVECS DGFTLAERDA DLRGFGNVDA
GGDAQTGSSR LLFWGVNLTR QDIERGAERL GLLEAA
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