| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0378 |
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| Symbol | gspE |
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| ID | 4788006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | - |
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| Start bp | 330461 |
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| End bp | 332212 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640092810 |
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| Product | pili biogenesis ATPase |
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| Protein accession | YP_001023388 |
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| Protein GI | 124262918 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCCC GGCGGCTGCA GCCGCGGCCG AGACCGCCGC CTCCGGCGCC GCGCAGGCCC
TGCCGACGCC CAAGCTCCAG AGCGAGCCGA AGGAGTCGAA GCGTGGCTCG TGAACCAGAT
CTGTTCATCC CGTCGGGCCA CCACGACAAG GCGGCTGTCG ACTACCTGAA CGCGCTTTTC
AGCGAGGCGG CCCGGCAAGG TGCAAACGAC GTCCACATGC AGTGGTGGGA CGCCATCTGC
GAGATCAAGC TGCGCCTATC GGGCGACCTC GAGACCTACG ATCGCGTCGA CTCCCAGCTG
GCCAAGCTGA TAGACGAGAA GATCCGCTCG CGTGCAAACC TCTCCGCAGC TGATCGCAAT
GTTCCGCTGG ATGGGCGCAT GCGCCTGCGG TTCCCGGAGC GCACGATCGA CGTTCGCCTG
TCCGTCCTGC CTGTCATCGG CGGCCAGAAG ATGGTGTGCC GGATCCTGGA CCAGTCGAAC
GCAGCGAAGA GCCTGGACAC GATCGAGATG ACGCCCATGG TTCGCCGGTG CGTGGACGAG
CTCATCGACG AGCCGCAAGG CCTTCTGCTG GTGGTCGGCC CGACCGGCTC CGGAAAGACC
ACCACCCTGT ACGGTCTCAT CGGCGCGTTG AACAACGGCC GCCGCAACAT CATCACTCTC
GAGCATCCGG TCGAATACGT GATCCCCGGG ATCTCCCAGG TGAACATCGA CCACCACCTG
TCCTTCGCGG ACGGCCTGCG CGCCGCTCTA CGGCAGGACC CGGACGTGAT CCTGGTGGGC
GAGATCCGGG ACCAGGAGAC GGCAACCATC GCGGTCCAGG CGGCCAACAC CGGTCACCTG
GTGCTCGCCA CCCTGCACGC CAACAGCGCG GCCCTGGCCA TCACGCGCCT GGTCGACATG
GGCGTCGATC CCCACTCCCT GGCTGCGTCG CTGCGCGGCG TCATGGCGCA GCGGCTCGTG
CGGCGCATCA CCGAAGAGTC GGCACCGCTC TGGCAGCAGC CGACCGAGGC GGACCAGGTC
TGGCTCGCGA AGCACCAGAT GCAGTCGGTT TCGGACATCT ACCCGGTCGT CGACAGCCCC
AAGAGATATG TCGGCATGGT GCCGGTCATC GAGATGATCC GTGCTGACAG CCACGTCCGC
GCTGCGTTGC TTGCGCAGCA GGGAGAACTG CCGATCCTCA ACGCGGCCGC GCGACAGCCT
CAGTTCGAGA CGCTGGCGCA GGCCGGCGTG CGCCTGGCAT CCAACGGCTA CACGACCATC
GAGCAGATCA AGAAGATCGT CGGCGACGAC GCGATCGCGC CGCAAGTCAA GCGCGTCGGC
GACGTGCTGG TGGACATGGG TGTGCTGACG CACGAACAGG TCTTCCAGGC GATCGAGAAG
CAGACCGAGC TGCGCAAGGC CGGCTCGGTG CGGCGAATGG GCGAGATCAT CGTCGAGGAA
GGGTGGTGCA CGCCCGAGCA GCTCGCTCGA GCGCTGGGAT TCACCGAGGG CGCGCCGGCG
ATCCTCGATC ACCTCGTGCG CAGCGGAAAG ATCCCGCGCA ACGACCTGGC CGGCGTCGTC
CGTCGTTGGC AAGAGTCACA CCAGAACAGC TCCCTCTTCG ACCTGTGCGA AGAGGCCGGT
CTCATTTCCA AGGAAGATCT CCATGAACCG TCGATTCTTT TCAGCCCTGG CACTGGGCTC
TATCTTGCTG CCGTCGCTGG CACGCGCGCA GACGGCCATG ACGCCGTTCA AGGAAGTGCA
GCCGCAGCCT GA
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| Protein sequence | MKSRRLQPRP RPPPPAPRRP CRRPSSRASR RSRSVAREPD LFIPSGHHDK AAVDYLNALF
SEAARQGAND VHMQWWDAIC EIKLRLSGDL ETYDRVDSQL AKLIDEKIRS RANLSAADRN
VPLDGRMRLR FPERTIDVRL SVLPVIGGQK MVCRILDQSN AAKSLDTIEM TPMVRRCVDE
LIDEPQGLLL VVGPTGSGKT TTLYGLIGAL NNGRRNIITL EHPVEYVIPG ISQVNIDHHL
SFADGLRAAL RQDPDVILVG EIRDQETATI AVQAANTGHL VLATLHANSA ALAITRLVDM
GVDPHSLAAS LRGVMAQRLV RRITEESAPL WQQPTEADQV WLAKHQMQSV SDIYPVVDSP
KRYVGMVPVI EMIRADSHVR AALLAQQGEL PILNAAARQP QFETLAQAGV RLASNGYTTI
EQIKKIVGDD AIAPQVKRVG DVLVDMGVLT HEQVFQAIEK QTELRKAGSV RRMGEIIVEE
GWCTPEQLAR ALGFTEGAPA ILDHLVRSGK IPRNDLAGVV RRWQESHQNS SLFDLCEEAG
LISKEDLHEP SILFSPGTGL YLAAVAGTRA DGHDAVQGSA AAA
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