| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0326 |
|---|
| Symbol | |
|---|
| ID | 4787954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 271094 |
|---|
| End bp | 273298 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640092758 |
|---|
| Product | ATP-dependent helicase |
|---|
| Protein accession | YP_001023336 |
|---|
| Protein GI | 124262866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACA GCAAGTCCTT CTTCCTGCTG GACGAGAGGA TCCGGCGCTT CATCTGGACG
CAGGGCTGGG ATCAGCTGCG CCCGGCACAG GAAGCGGCCA TCCCGCTCAT CGTCGAGGCT
GATCGCGACG TCATCGTGGC CGCGGCGACC GCCGCCGGCA AGACGGAAGC GGCAATGCTG
CCGGCGCTCA CGCACCTGCT GCGCCGGGAG CCCGCTGACG GCCTGGTGGT CTACGTCAGC
CCGTTGAAGG CGCTGATCAA CGACCAGTTC GGCCGCCTCG AGGCCCTGTG CGCCGACCTG
GACATCCCTG TGTGGCCCTG GCATGGCGAC ATTGCGTCGA GCCAGAAGAC ACGGTTCCTG
AAGGCGCCGC GCGGCGTGCT GCTGATCACG CCGGAATCGC TGGAAGCGCT GCTCGTGAAC
CGTGGCCACG CCATCGCCGG CACGCTGGCG CGCCTAGCCT ACGTCGTGAT CGACGAGCTG
CACTCCTTCA TCGGTTCGGA GCGTGGCAAG CAGCTGCAGT CGCTGATGCA CCGCATCGAC
CTGGCGCTCG GGCGTCGCGT GCCGCGCGTG GGGCTGTCCG CCACGCTGGG CGACATGAAC
ATGGCTGCCG ACTTCCTGCG CCCGGGCTGC GGCCGCGGAG TGGCGATGGT CAACTCCGGC
CGCGGCGCCG GTGAGGTCAA GGTCATCGTC AAGGGCTACG AAGAGCCCTT CGTGCCTCGC
GAGGGCGACG CGCGCGGGCC TCGTGAGCCC AGTACGCCGG CCCAGGTGGC GCAGCACATG
TACGGCGTCT TGCGCGGCGC GAACAACCTG GTGTTCCCGA ACAGCCGGCG CGAGGTCGAG
CGCTACACGC ACCTGCTGAA CAGCCTGTGC AAGGCCGATG GGGTGCCGCC GGAGTTCTGG
CCGCACCACG GCAGCCTGTC GAAGGAGATC CGCACGGACA CCGAGGCGGC GCTCAAGCGC
ACCGACGGCG TGGCCACGGC CATCTGCACG AACACGCTCG AGCTCGGCAT CGACATCGGC
CCGGTCAAGA GCGTCGCCCA GGTCGGGCCG CCATCCTCCG TCGCCGGCCT GCGCCAGCGC
CTGGGGCGCT CGGGCCGCCG CAAGGGGGAA CCGGCGATCC TGCGCGGCTA CTCGATCGAG
GACGCAGTCA CCGTCGAGTC GGACCTGGAC GTGCGCCTGC GCGTCAGCAC GGTGCAGCTG
GCCGCGATGG TCGGCCTGGC GCTCGAAGGC TGGTTCGAGC CGCCCGTGAC GAACGGCGCG
CACCTGTCCA CCCTCGTGCA GCAGCTGATG TCGCTGATCG CGCAGCGGGG CGGGGTCATG
GCCGCCGAGG CCTACCGCGA CCTGTGCGGA CCGCAGGCGC CCTTCTCGGG CGTCGGCAAG
GCCGACTTCG CGGCACTGCT GCGCCACCTG GCCTCCAAGG ACCTGATCGT CCAAGAAGAA
GCCGGCCTTC TCCTGCATGG TGGCGTCGGC GAGCGCATCG TCAACCACTA CAGCTTCTAT
GCGGCCTTCG CCGCGGAAGA GGAGTACCGC CTCATCTCGG GCGGCAGACC GCTGGGAACG
CTGCCGCTGT CGCAGGCATT GGTGGCCGGG CAGCGCATCC TCTTCGCCGG CCGGACCTGG
CGCGTCGATG AGGTGGCGGA GAAGGAGCGC ACGATCTACG TGACGCAGAC GAAGGGCGGC
GCACCGCCGC TGTTCACAGG CGAGTCGGGG CGCGTGCACA CACGCGTGCG CCAGCGCATG
CGCGAGATCC TCCGCGGCGA GGTCGAGCCC GGGTTCCTGG ATCCAACCGC TGCTCGCTTC
GTGGCCGAGG CCCGGCGCGC CTACGCCGAT CTCCAGCTCG ACCAGGTCGT GCTGGTGGAT
TCGGGCGCGC AGGTGCGGCT GTTCACGTGG CTGGGCGACG CTGCGAACGA GGCGATCGTC
TTCCTGCTGC TCAGCCGTGG CCTCACGGCC ACCCTGGCCG GGCCGGGCAT CGACATCCAG
AAAGGTGAAA TGTCCGAGCA GGGCATCGCC GCGGTCCTCG CCGACCTGGC CGGCTGCGAG
ATCCCGCAGC CAGAGCAACT CCTGGCCGGC GCCGCGAACA TCGACCGAGA GAAGTGGGAC
TGGGCGCTGC CGGACGTGAT GCTGCGCCGC TCCTACGCCA GCTTGCGCCT CGACCCCAAC
GAGGCGAGCG CCTGGCTGGC CGAACACGCC AAGTCGGCGG CCTGA
|
|---|
| Protein sequence | MSDSKSFFLL DERIRRFIWT QGWDQLRPAQ EAAIPLIVEA DRDVIVAAAT AAGKTEAAML
PALTHLLRRE PADGLVVYVS PLKALINDQF GRLEALCADL DIPVWPWHGD IASSQKTRFL
KAPRGVLLIT PESLEALLVN RGHAIAGTLA RLAYVVIDEL HSFIGSERGK QLQSLMHRID
LALGRRVPRV GLSATLGDMN MAADFLRPGC GRGVAMVNSG RGAGEVKVIV KGYEEPFVPR
EGDARGPREP STPAQVAQHM YGVLRGANNL VFPNSRREVE RYTHLLNSLC KADGVPPEFW
PHHGSLSKEI RTDTEAALKR TDGVATAICT NTLELGIDIG PVKSVAQVGP PSSVAGLRQR
LGRSGRRKGE PAILRGYSIE DAVTVESDLD VRLRVSTVQL AAMVGLALEG WFEPPVTNGA
HLSTLVQQLM SLIAQRGGVM AAEAYRDLCG PQAPFSGVGK ADFAALLRHL ASKDLIVQEE
AGLLLHGGVG ERIVNHYSFY AAFAAEEEYR LISGGRPLGT LPLSQALVAG QRILFAGRTW
RVDEVAEKER TIYVTQTKGG APPLFTGESG RVHTRVRQRM REILRGEVEP GFLDPTAARF
VAEARRAYAD LQLDQVVLVD SGAQVRLFTW LGDAANEAIV FLLLSRGLTA TLAGPGIDIQ
KGEMSEQGIA AVLADLAGCE IPQPEQLLAG AANIDREKWD WALPDVMLRR SYASLRLDPN
EASAWLAEHA KSAA
|
|---|
| |