| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0043 |
|---|
| Symbol | |
|---|
| ID | 4787646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 35521 |
|---|
| End bp | 36051 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640092453 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023058 |
|---|
| Protein GI | 124262588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000586476 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTT CCTGCCACCG GACTCAGTCC ACCCCGGCCA CCCGCTCCGC AGCTGCCAGT
GCTCTGGCGT GTCTCGCACT CGTCGGATGT GCTCTGCCCC AGACGCGCGA CGAGATGCTC
TCCGCCGCGT CCTCACCGGT CAGGGTCTGC TCCTCGGAGC TAACCACGGC CGGCGCCGCC
GAGCGGTTGG AGGCCGCCTG GCAGAGATGC TTCGTCAGCC CTCGAACGAT GGGCGTCGCG
CAGACGGGAA GCGGAGCCGT CTTCTACGAG CAGTCGCGAC TCGTCGTCTT CCGAGACCGA
GTCGGAGACG CGACTGTCCT GTCGACCCGC ATCGCACGCC GACCGCTGGA CCTTCCGACG
CCGCTGAACC AGGCGCTCTT CCTGATGGCC GACATCCGCG AGACCCCCGA GTGCAAGTCC
GAGGTGGTCG TGCGTGCGGC GGCCGAGAAC TGGCAGAAAG TGGCCGGCGC CACGGAGAAG
TGGCTCTCGG ACCCGCTGCA GCAAGTGCCG GAAGCTGGTT GCCGTCGATG A
|
|---|
| Protein sequence | MPPSCHRTQS TPATRSAAAS ALACLALVGC ALPQTRDEML SAASSPVRVC SSELTTAGAA
ERLEAAWQRC FVSPRTMGVA QTGSGAVFYE QSRLVVFRDR VGDATVLSTR IARRPLDLPT
PLNQALFLMA DIRETPECKS EVVVRAAAEN WQKVAGATEK WLSDPLQQVP EAGCRR
|
|---|
| |