| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0026 |
|---|
| Symbol | |
|---|
| ID | 4787629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 23248 |
|---|
| End bp | 23967 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640092437 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023042 |
|---|
| Protein GI | 124262572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.371687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00178086 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGC CCTGCTTTTC GCGTCTGACG CGAAGCTCAT CAATCGGAGT GAACAACTTG
AGCCGGACCG TTTTGCTGGC CATCACAGCG CTGTCTCTCA TCTCATTCGG GGCGAACGCG
GAGACCGTCA CCTACCTCGG CAGGTCGATC AATCTCGACC CGCCGCCCGG GTTCTGTCAG
TTGAACAGCT CTCCCGAGGA GCGGGCGTTG TTCGAGTACC AGCGCCGCAA TACCGAGCCG
GCAGGAGAAC TCGCCCAGTT CGCGGTGCCT TGCACTGAGT TGGCCGACGT CCGCGCACTG
AAGGCTGATC GCTTCACGAG ATGGGTTCAG GTGCTCGTCC TCAAGCGCAA AGGGCAGCTA
CTGCCTGTTT CGGCACCTCG TACGCAGTTC GTTCGAGGAC TTGCTGGACA CTTTGCGGAC
ACCCCACTAG ACGTCGAGAG GCTGTCGCGC CGGGCGAACA AGCACCTCGC GCAGACCAAC
ACGGCAGTGA CTGACTTCAG TTACGAGCCG CTGGGTACAA CCCAAGACGC CTTCTTCACC
CGAATGAAGA TGATGGCTCA GGTAGGTACT GTGACCAGTC CCGTCTCGGC AATCGCGGCT
ACGACGGTGG TCAACCAGCT GCCCATCGGC GTCTATGCCT TCGGAACACC CAAGGCCAAG
GGCGAGCCAG CCATCGAGAC GACGCGCGCC TACCTTCGGC AGATTCTTGA TCGGAACTAG
|
|---|
| Protein sequence | MNVPCFSRLT RSSSIGVNNL SRTVLLAITA LSLISFGANA ETVTYLGRSI NLDPPPGFCQ
LNSSPEERAL FEYQRRNTEP AGELAQFAVP CTELADVRAL KADRFTRWVQ VLVLKRKGQL
LPVSAPRTQF VRGLAGHFAD TPLDVERLSR RANKHLAQTN TAVTDFSYEP LGTTQDAFFT
RMKMMAQVGT VTSPVSAIAA TTVVNQLPIG VYAFGTPKAK GEPAIETTRA YLRQILDRN
|
|---|
| |