| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3825 |
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| Symbol | |
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| ID | 4785936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4041447 |
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| End bp | 4043108 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640092408 |
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| Product | protein translocase subunit yidC |
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| Protein accession | YP_001023013 |
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| Protein GI | 124269009 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TGCGCCGCAC CCTGCTGTGG GTGGTGTTCA CGATGTCGCT CGTCCTGTTG
TGGGACGCGT GGAACAAGCA CACCGGCCAG CCCTCGATGT TCGCGCCGGC GCCGCGGCCG
GTCGCGGCCG CCAGTGCGCC CGGCGTCACG CCGCCAGCCT CGTCGGTGCT GCCGTCCGCC
ACGGCGGTGG CGCCGGCAGC CGGCAGCGGC GCACCACCGG CCCTGGTGGC GCCGCCCGCC
ACGGCGCCGA CCGTGACCGT GAGCACCGAC GTTCTGAAGC TCACGCTCGA TTCGCGCGGC
GGCGACGTGG TGCATGCCGA GCTGCTGACC CAGGTGGACC AGAACGACCG CACTCGCAAC
GTGGTGTTGT TCGACCGCTC GAAGGAGCGC GTCTACCTTG CGCAGACCGG CCTGGTGGGC
GCTCCCGATC TGCCCAACCA CCTGACGGCC TACACGCTGG TGCCCGGCGA GACCAGCCTG
GCCGCGGGCA AGGACGCGCT GGAGGTGGTG TTCGAGTCAC CCGAGCAGGG CGGCGTGAAG
CTGAGGAAGA CGCTGACCCT GCAGCGCGGC AACTACGCGG TGCAGGTGCG CCACGACGTG
GTGAACACCG GCACCGCCGC GCTCTCGCCG CAGCTCTATG TGCAGCTGGT GCGCGACGGC
AACGCGCCCC CGGGGGAGTC GAGCTTCTAC AGCACCTTCA CCGGCCCGGT GGTCTACACC
GACGCCAGCA AGTTCCACAA GGTCGACTTC AAGTCGATCG AGAAGGGCAA CACCGAGCAC
GACAAGACCG CCGACAACGG CTGGGTCGCG ATGGTGCAGC ACTATTTCTT CTCGGCCTGG
CTGCACAACG ACAAGGCGCC GCGTGAGTTC TACACGCGCA AGATCGATGT CAACCTGTAC
GCGGTGGGCC AGCTGTTCCC GCTGGGAGAG ATCGCCCCGG GCGCAAGCAA GCAGTTCGAC
AGCGTGCTGT TCGTGGGCCC GCAGGAAGAA AAGAAGCTCG AGACCCTGGC CCCCGGCCTG
GAGCTGGTGA AGGACTACGG CTGGTTCACG ATCATCGCGA AGCCGCTGTT CTGGCTGCTC
GACCAGCTGC ACAAGCTGAT CGGCAACTGG GGCTGGGCGA TCGTGGCGCT GGTGGTGCTG
CTGAAGGCGG CGTTCTACTG GCTCAACGCC AAGGCCTATG CGTCGATGGC GAAGATGAAA
GCCATCAACC CGAAGATCAT GGAGATGCGC GAGCGGCTGA AGGACAAGCC GCAGCAGATG
CAGCAGGAGA TGATGCGCAT CTACAAGGAG GAGAAGGTCA ACCCGCTCGG CGGCTGCCTT
CCGATCCTGG TGCAGATGCC GGTGTTCATT GCGCTGTACT GGGTGCTGCT GTCGAGCGTG
GAGATGCGCA ACGCACCCTG GCTGGGCTGG ATCACCGACC TGTCGGTGCG CGACCCGCTG
TTCATCCTGC CGATCGTGAT GACCGGCACC ACGCTGCTGC AGACCTGGCT GAACCCGACG
CCGCCGGATC CGATGCAGGC CAAGATGATG TGGATCATGC CGCTGGTGTT CTCGGTGATG
TTCTTCTTCT TCCCGGCCGG CCTGGTGCTG TACTGGATCA CCAACAACCT GCTGTCGATC
GCACAGCAGT GGGTGATCAA CCGGCGGCTG GGCGTGAACT GA
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| Protein sequence | MTDMRRTLLW VVFTMSLVLL WDAWNKHTGQ PSMFAPAPRP VAAASAPGVT PPASSVLPSA
TAVAPAAGSG APPALVAPPA TAPTVTVSTD VLKLTLDSRG GDVVHAELLT QVDQNDRTRN
VVLFDRSKER VYLAQTGLVG APDLPNHLTA YTLVPGETSL AAGKDALEVV FESPEQGGVK
LRKTLTLQRG NYAVQVRHDV VNTGTAALSP QLYVQLVRDG NAPPGESSFY STFTGPVVYT
DASKFHKVDF KSIEKGNTEH DKTADNGWVA MVQHYFFSAW LHNDKAPREF YTRKIDVNLY
AVGQLFPLGE IAPGASKQFD SVLFVGPQEE KKLETLAPGL ELVKDYGWFT IIAKPLFWLL
DQLHKLIGNW GWAIVALVVL LKAAFYWLNA KAYASMAKMK AINPKIMEMR ERLKDKPQQM
QQEMMRIYKE EKVNPLGGCL PILVQMPVFI ALYWVLLSSV EMRNAPWLGW ITDLSVRDPL
FILPIVMTGT TLLQTWLNPT PPDPMQAKMM WIMPLVFSVM FFFFPAGLVL YWITNNLLSI
AQQWVINRRL GVN
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