Gene Mpe_A3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3804 
Symbol 
ID4785915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp4023445 
End bp4024164 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID640092387 
Productputative transmembrane protein 
Protein accessionYP_001022992 
Protein GI124268988 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0273275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCTG GCGGCCCTTC GGGCGGTGCC CGGACGCGCC CTCGGTCGAC AAGCGAATGG 
CCGGGGACTG AGAATCCCGC GATGGATCTG AAACCCCTGA TCGCACTCCT GGCCATCGTC
AACCCGATCG GCGCCATTCC CTTCTTCATC ACCTTCACCA GCGGTTTCAA CCGGCAGCAG
CGCCAGCGCA CCATTCGGGT GAGCGCCTTC AGCGCCTTCC TCGTGATCTC GATCAGCGCG
GTGGCAGGGC TGAAGATCAT CGAGTTCTTC GGCATCAGCA TCGCCTCCTT CCAGGTCGGC
GGCGGCACGC TGCTGCTGAT CAGCTCGCTG CAGATGCTCA ACGCCCAGCC GGCCGACACC
AGCAAGGAAG ACATGAGCGA GGGCGCCCAG AAGGCCGACG CCGGGGCCAG CATCGCAGTC
GTGCCGCTGA CGATCCCGCT GCTGACCGGC CCGGCCACCA TCTCGACGAT GGTCATCTAC
GCCGAGCGCA CGCGCCACTG GTGGCAACTG GGCACGCTGG TGCTCTACGG GGTGGTGATC
GGCGCAGCGG TCTACCTGGC CTTCATCGCC TCGGGCCGCA TCGCGCGGGT GCTGGGCAAG
ACCGGCATCA ACGTGATGAC GCGGCTGATG GGCCTGATCC TGGCGGCGAT GGCGGTGGAG
ATCATGGCCG AAGGGCTGGC CAAACTGTTC CCGGTGCTCG CATCGGCGAT TCCGCGATGA
 
Protein sequence
MRPGGPSGGA RTRPRSTSEW PGTENPAMDL KPLIALLAIV NPIGAIPFFI TFTSGFNRQQ 
RQRTIRVSAF SAFLVISISA VAGLKIIEFF GISIASFQVG GGTLLLISSL QMLNAQPADT
SKEDMSEGAQ KADAGASIAV VPLTIPLLTG PATISTMVIY AERTRHWWQL GTLVLYGVVI
GAAVYLAFIA SGRIARVLGK TGINVMTRLM GLILAAMAVE IMAEGLAKLF PVLASAIPR