| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3653 |
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| Symbol | |
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| ID | 4786119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3863712 |
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| End bp | 3865034 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640092235 |
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| Product | TRAP transporter, DctM subunit |
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| Protein accession | YP_001022841 |
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| Protein GI | 124268837 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.836433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT ACCTGCCCTT CTTCATGCTG CCGCTGGCCT TCACGCTGAT GTTCCTCGGC
GTGCAGGTGG CGTTCGCGAT GATGCTGACC GCGGCCGCCT TCGGGCTGGC CATCTTCGGT
CCCAACGTCA TCCACCAGTT CGTCGAGAAG ATCGACGACC TGTCGTCGAA CTTCGTGTTC
GCCGCGGTGC CGCTGTTCGT CTTCATGGGC GCGATGCTCG AGAAGTCGGG CATCGCCGAC
CGCCTGTTCG AGGCCATCCA CATCTGGACG CGCCGCCTGC CCGGCGGCCT GGCGATCGCC
ACGGTGTTGA TGTGCATCGT GTTCGCGGCC TCCAGCGGCG TGATCGGCGC GACCGAGTCG
GTGGTGGGCC TGCTCACGAT CCCGATCATG CTGCGCTACG GCTACAACAA GAGCCTGATC
AGCGGCACCA TCTGCGCCGG CGGCTCGCTG GGCACCATCA TCCCGCCGTC GGTCGTGGTG
GTCGTGATGG GCCCGCTGGC CAACCTGTCG GTCGGCGACC TGATGTACGG CATGGTGCTG
CCGGGCTTCC TGATGGCCGG GCTCTACCTC GCCTACATCT TCGTGCTGTG CATCGTGAAG
CCGGAGATGG GGCGGCGCAT CCCGCCGGAG CCCGGCGATC CGACCTTCAT GCAGAAGCTC
GCCATCACCA CCCGCAATCT GGTGCCACCG CTGGGCATGA TCGTCGCGGT TCTCGGCTCC
ATCCTGCTGG GCCTGGCGTC GCCGACCGAG GCGGCCGCGA TCGGCGCGCT CTGCTCGGTG
GGACTGACCG TGCTCTACGG CCGCTTCACC TGGCCGGGGC TGTACGAGTC GCTGCTGAAG
ACGCTGCGCG TCACCGCGAT GATCATGTTC GTGCTGCTGG GCGGCACGCT GTTCACCGGC
GTCTTCATCG GCGGCGGCGG CATCAATCTC GCCAGCTCGA TGATCACGCA CCTGGACCTG
TCGCCGTGGG CGCTGCTGGG GATGATGCTG TTCATCCTGT TCATCGCCGG CTTCTTCCTC
GACTGGATCT CGATCGTGCT GATCTTCCTG CCGATCTTCA CGCCGCTGGT CACCGCGGCG
GGCTTCGATC CGGTGTGGTT CTGCATCCTG TTCCTGATCA TGATCCAGAC CAGCTACCTG
ACGCCGCCGA TGGCGCCGGC CATCTTCTAC CTGCGTGCCG TGGCACCGCC GGAGATCACG
ATGCGGCACA TGTACTGGGG AATGATCCCG TTCATCGCGC TGCAGGTCAT CACGCTGGCC
TGCACGCTGA TGTGGCCCCA GCTCGTGACC TGGCTGCCGA GCGTCGCGAT GCAGATGAGG
TGA
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| Protein sequence | MSDYLPFFML PLAFTLMFLG VQVAFAMMLT AAAFGLAIFG PNVIHQFVEK IDDLSSNFVF
AAVPLFVFMG AMLEKSGIAD RLFEAIHIWT RRLPGGLAIA TVLMCIVFAA SSGVIGATES
VVGLLTIPIM LRYGYNKSLI SGTICAGGSL GTIIPPSVVV VVMGPLANLS VGDLMYGMVL
PGFLMAGLYL AYIFVLCIVK PEMGRRIPPE PGDPTFMQKL AITTRNLVPP LGMIVAVLGS
ILLGLASPTE AAAIGALCSV GLTVLYGRFT WPGLYESLLK TLRVTAMIMF VLLGGTLFTG
VFIGGGGINL ASSMITHLDL SPWALLGMML FILFIAGFFL DWISIVLIFL PIFTPLVTAA
GFDPVWFCIL FLIMIQTSYL TPPMAPAIFY LRAVAPPEIT MRHMYWGMIP FIALQVITLA
CTLMWPQLVT WLPSVAMQMR
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