| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3617 |
|---|
| Symbol | |
|---|
| ID | 4786143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3826506 |
|---|
| End bp | 3827048 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640092199 |
|---|
| Product | lactoylglutathione lyase |
|---|
| Protein accession | YP_001022805 |
|---|
| Protein GI | 124268801 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00824672 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.114242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA CCACCGAACA ACAGCCCGGC GTCTGCGAGC AGGCCCCGGC CGCGACGAAG
GGCTTCACGC TGAACCACAG CATGCTGCGC GTGAAGGATC CGAAGGTTTC GCTGGACTTC
TACACGCGCG TGCTCGGCAT GCGCCTGCTG CGCAAGCTGG ACTTTCCGGA GATGAGCTTC
TCGCTCTACT TCCTGGCGCA GGCCGAGGAA GCCGCCATGG CGCCGCAGGA CGTGGGCGAG
CGCACCGCGT GGACCTTCGC GCAGCGCGGC ATCCTGGAGC TCACGCACAA CTGGGGCACC
GAGAACGACA CCGAGTTCAA GTACCACGAC GGCAATGCCA AGCCGCAGGG CTTCGGCCAC
ATCTGCATCT CGGTGCCCGA CCTCGACGCC GCGGTGCGCT GGTTCGACGA GAACGGCGTG
ACCTACGTGA AGCGTCCCGA GCAGGGCAAG ATGAAGGACG TGGCCTTCAT CAAGGACGCC
GACGGCTACT GGATCGAGAT CGTCGAGCCG GCGCGGCTGG CGAAGCTGGG ACGCCCGGCT
TGA
|
|---|
| Protein sequence | MSFTTEQQPG VCEQAPAATK GFTLNHSMLR VKDPKVSLDF YTRVLGMRLL RKLDFPEMSF
SLYFLAQAEE AAMAPQDVGE RTAWTFAQRG ILELTHNWGT ENDTEFKYHD GNAKPQGFGH
ICISVPDLDA AVRWFDENGV TYVKRPEQGK MKDVAFIKDA DGYWIEIVEP ARLAKLGRPA
|
|---|
| |