| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3407 |
|---|
| Symbol | |
|---|
| ID | 4786337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3622288 |
|---|
| End bp | 3622914 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640091983 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022595 |
|---|
| Protein GI | 124268591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0442494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAC GACGCTCGTC CACGTTCGCG ACGCCCGCCA TGTGCCGGCA GCGCGGCGCC
GTTCTGATCA TCAGCCTGAT CGTGCTGGTG GTGATGCTGA TCTCGGCGGC CGCGCTGATG
CGCTCCTTCG ACATCACGCT GACCACCGCC GGCAACCTTG CCTTCAAGCG CGATGTGGCC
CAGCAAAGCG AACGTGCAGC AGAGGTCATC CTCACTCAGT TCCGCACCGG CGGCGCATTG
GTCGGCATTG CCGCGCGTGG CGCCAATGCG CCGGCCTGGA ACTACAGCGC CACGGTATTG
CCCAGCAATG CGCAGGGCAT TCCTCTCGTC CTCGTGGACG ACGCTGCGTT TGCGGCAACC
GGCTGGACTC ATGGCGACAT CACGGTCCCG GCGCAACAGA TCCGCTTGCG CTTCGCGGTC
GACCGGTTGT GCACCATCAA CGGCAGCACA GAAGAGCCGG AGAACTGTGT CTACTCGGGC
GAAGGGTTGC CGGAGGGCGG AAGCCTGTCC GAAGAAAAGC GCCCACCTCC ACCGGGCATG
GTGGTGTATC GCCTGACGAT CCGCGCCACC GGGCCACGCG ACACGCAATC ATTCTTCCAG
AGCACGTTTT CCTGCTGCGG CGTCTGA
|
|---|
| Protein sequence | MKLRRSSTFA TPAMCRQRGA VLIISLIVLV VMLISAAALM RSFDITLTTA GNLAFKRDVA
QQSERAAEVI LTQFRTGGAL VGIAARGANA PAWNYSATVL PSNAQGIPLV LVDDAAFAAT
GWTHGDITVP AQQIRLRFAV DRLCTINGST EEPENCVYSG EGLPEGGSLS EEKRPPPPGM
VVYRLTIRAT GPRDTQSFFQ STFSCCGV
|
|---|
| |