Gene Mpe_A3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3287 
Symbol 
ID4786446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3496112 
End bp3496894 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID640091860 
Productputative hemolysin 
Protein accessionYP_001022475 
Protein GI124268471 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.131488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAG TTGATCAGTT GATTGTCCAG CGTGGGCTTG CGCCGACGCG TTCGGCGGCG 
CAGCGGTTGA TCGACCGTGG CGCGGTCGAG CGGCGCGCGG CGGTCGACTG GGTGCGGCTG
CGCAAATCCG GCGAGGACCT GCCGGAGGCC ACCGAGCTGC GCATCACCGA CGACGCCGAA
CTGCGCTGGG TGTCGCGCGC CGGGCTCAAG CTCGACGGCG CGCTGGCGCA GTGCGGCCTG
GCGGTGACCG GCGTGACCGC GCTCGACGTC GGCCAGAGCA CCGGCGGCTT CACCGAGGTG
CTGCTGGCGC ACGGCGCGGC GCACGTGGTG GGCGTCGATG TCGGTCGCGG CCAGCTGCAT
CCCTCGCTGC GCGGGCATGC GCAGGTCACC GTCCTCGAAG GCATCAACGC CCGCGGCCTG
ACGCGCGAGG CGCTGGGCGC GGCCATGCCG GCCGGCGGCT TCGGCCTGGT CGTCGCCGAC
CTGAGCTTCA TCCCGCTGAC CACCGTGCTG CCGGCACTGG TGCCGCTGCT CGCGGCCGAC
GGCCACCTGC TCGCGCTGGT CAAGCCGCAG TTCGAGCTGC AGCCCAAGGA CATCGGCAAG
GGCGGTCTGG TGAAGAGCGC CGCCTCCTAC GCCGAGGTGC AGCGCAAGTT GCGGGCCACC
TGCGGCGAAC TGGGCCTGGA CGTGACGGCG TGGCTGGACA GCGTGGTTGC CGGCGGCGAC
GGGAACCGCG AATTTTTCAT CTGTGCCGTG CCCGCGGGCC GGCCGCTGGA GTCAGACACA
TGA
 
Protein sequence
MPRVDQLIVQ RGLAPTRSAA QRLIDRGAVE RRAAVDWVRL RKSGEDLPEA TELRITDDAE 
LRWVSRAGLK LDGALAQCGL AVTGVTALDV GQSTGGFTEV LLAHGAAHVV GVDVGRGQLH
PSLRGHAQVT VLEGINARGL TREALGAAMP AGGFGLVVAD LSFIPLTTVL PALVPLLAAD
GHLLALVKPQ FELQPKDIGK GGLVKSAASY AEVQRKLRAT CGELGLDVTA WLDSVVAGGD
GNREFFICAV PAGRPLESDT