| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3126 |
|---|
| Symbol | |
|---|
| ID | 4786639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3327428 |
|---|
| End bp | 3328525 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640091697 |
|---|
| Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001022314 |
|---|
| Protein GI | 124268310 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0865922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCC AGCGCTCCCT CATTGCTCCC ACCGCGCATC CGCGACTCGA AGATGCGCTG
CGGCAGAAGC TGCAGCACCG CGCCGAGACG GCCGGCAGCC TGGGTGAACT CGAACCCTTG
GCGGTGCGGC TGGGGCTGAT CCAGAACTCG CTGAAGCCCC GGCTGAAAAG CCCGCAGTTG
GTGGTGTTCG CCGGCGATCA CGGGCTGGTC GTCGACGGAC TGTCGACGCG CGGTGATTCG
ACGTCGCAGC AGGTCACGCA CCTGCTCGCC GGACGGCTGC CGATGGCCGT GTTCTCGTTC
ATCCAGGGCA TGGGCCTCAC GGTCGTCGAT GCCGGCCTGG CCGAGACGAT GAGCCCCTAC
CCCAGCCTGC TCCAGCGCAA GATCGGTTTC GGCACCCGCA GTGCGCGGTC CGGCCCGGCG
ATGTCGATCG ACCAGGCGCA CGCCGCAATC CGCGCCGGCA TGGAGATCGC CGACTCGCTC
AGCGGCAATG TCCTGGCCTG CGCCGGCATC GGCGTCGGAG CCCACGAGAG CGCGTCGCTG
GTGCTGTCGC GGCTGGCGGA CATCCCGCTA CGGGACCTGA CCATTTCCGG CCCCGATATG
CCGCCCGATG CGCTGGCGCA GACGATGGTG GTGCTGCAGA GCACCCAGGG TCGCCACCGC
GACGTGACTG ATCCGGTCGA GGTGCTGGCC GCCTTCGGAG GCTTCGAGGT GGCGACGATG
GTCGGCGCGA TGCTGGTCGC GGCCAGCAAG CGGCACCTGA TCATGGTCGA TGGCCTGCCA
GCGTGCGCAG CCCTGCTGGT GGCGGCCCGC ATCTCGGCAC CGGTGACCGA CTATGTCGTG
TTCTGCCGCA GCCATGGCCA CCGCGGCCTG GACCATGCGC TCAACCTCTT CCGCGCCAGC
GCTCTGCTCG AGCTCGGCAT GGAAAGCACC GACGGGACAG GATCTACGCT GGCCTGGCCA
CTGGTGCACA GCGCGGCCGC CCTGCTGACG CAAGTGGCCG AAGGCGAGGA TGCAGGTCCA
ACGCTGCCCT CGACGACCAC CCTCCCCACG CTCGACACGC CGGTCGAAGC CGATTTCGGC
TCCAGCACGC GACCCTGA
|
|---|
| Protein sequence | MSVQRSLIAP TAHPRLEDAL RQKLQHRAET AGSLGELEPL AVRLGLIQNS LKPRLKSPQL
VVFAGDHGLV VDGLSTRGDS TSQQVTHLLA GRLPMAVFSF IQGMGLTVVD AGLAETMSPY
PSLLQRKIGF GTRSARSGPA MSIDQAHAAI RAGMEIADSL SGNVLACAGI GVGAHESASL
VLSRLADIPL RDLTISGPDM PPDALAQTMV VLQSTQGRHR DVTDPVEVLA AFGGFEVATM
VGAMLVAASK RHLIMVDGLP ACAALLVAAR ISAPVTDYVV FCRSHGHRGL DHALNLFRAS
ALLELGMEST DGTGSTLAWP LVHSAAALLT QVAEGEDAGP TLPSTTTLPT LDTPVEADFG
SSTRP
|
|---|
| |