| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2674 |
|---|
| Symbol | |
|---|
| ID | 4784036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2848127 |
|---|
| End bp | 2851246 |
|---|
| Gene Length | 3120 bp |
|---|
| Protein Length | 1039 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640091245 |
|---|
| Product | cation efflux system protein, AcrB/AcrD/AcrF family protein |
|---|
| Protein accession | YP_001021863 |
|---|
| Protein GI | 124267859 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT GGCTCCTCGA CAACAGCCTG AGCAACCGGC TGCTGGTGAT CATCGCCAGC
GTGGTGCTGA TGGCCTACGG CGCATTCACG CTCTCGCGCA CACCGGTGGA CGTGTTCCCC
GACCTCAACA AGCCCACCGT CACGGTCATG ACCGAGGCCG GCGGCATGGC CGCCGAGGAG
GTGGAGCAGC TCATCACCTT CCCGCTCGAG ACCACGATGA ACGGGCTGCC CGGCGTGGAG
TCGGTGCGCT CCACCTCGTC GGCCGGCCTG TCCTTCCTCT ACGTCACCTT CGACTGGCGC
ACCGACATCT TCCGCGCCCG GCAACTGGTT TCGGAGCGCC TGTCGGCGAT GGAGGAAGGC
CTGGCCGAGG GCGTGCTGCC GCGCATGGGG CCGGTCAGCT CGATCATGGG CGAGATCCTG
CAGATCGCGA TCCCGGTCGA CGCGGCGAAG ATCTCGCCGA TGGCGGTGCG CGAGTACGCC
GACTGGGTGC TGCGCCCGCG GCTGCTGGCG GTGCCGGGCG TGGCGCAGGT GATCCCGATC
GGCGGTGAAG TGCGGCAGTT CCAGGTGCAG CCGGACACGC AGCGCATGGC CGAGCTGGGC
GTCACGCACG AGCAGCTGGA GGCCGCGCTG CGCGGCTACT CCAGCAACAC CTCGGGCGGC
TTCCTGGAAC TCAACGGCCG CGAGGTGCTG ATCCGCAACC TGGGCCGCAC CTCCCGGCTC
GAGGACCTGA AGGATCTGGC GCTCACCGCC CGCGACGGCC AGCCGCTGCT GCTGCGCCAG
ATCGCCGAGG TGAGCTTCGC CGCCGCGCTC AAGCGCGGCG ACGCCGGCTT CGAGGGCAAG
CCGGCCGTGA TCCTGGGCAT CCAGAAGCAG CCGACCGCCG ACACCATCGC GCTGACGCGC
GCGCTCGAGG AGGCCCTGCT CGGCCTGAAG TCCTCGCTGC CGCCGGGCAT GGAGGCGCCG
CAGGTCACGT TCCGCCAGGC GAGCTTCATC GAGGCCTCGA TCACCACGCT GCAGGGCAAG
CTGATCGGCG CTTCGGTGTT CGTCGCGCTG ATCCTGTTCT TCTTCCTCGG CACGCTGCGC
CCCACGCTGA TCGCGCTGAC GGCGATCCCG GTCTCGATCT TCATCACCGC GCTGGTGTTC
CGCTACTTCG GGCTGTCGAT CAACACCATG ACGCTGGGCG GCCTGGCGAT CGCCATCGGC
GGCCTGGTCG ACGATGCGGT GGTGGGCGTG GAGAACGTGC TGCGGCGCCT GAAGGAAGAC
CGTGCGAAGC ACCCCGACAA GCGCCTCCAC CCGATCGAGA TCGTGGGCCG CGCCACGATG
GAGGTGCGCT CGGCCATCCT GTACGCCACG GTGATCATCG TGCTGGTGTT CATTCCGCTG
TTCGCGCTGC CGGGGCTGGA GGGCCGGCTG TTCGTGCCGC TCGGCATCGC CTTCATCGTC
TCGACGCTGG CCTCGCTGGT GGTCTCGGTG ACCGTCACGC CGGTCCTCGG CTTCTACCTG
CTGCCGCGGA TGAAGAACAT CGACCACGGC GACACCCGGG TGCTGGCCTG GCTGAAGGCC
GGCTACCGCC GCAGCCTGCA GCGGGTGCTC GACCGCCCGC GCGCCGCGCT GGCCGCCGCG
GCGTCGGCGG TGCTGGTGGC CGCCGTGGCG GTGCCCTTCT TTCCCACCAC CTTCCTGCCG
CCGTTCAACG AGGGCACGCT GCTGATCGGC CTGCGCCTGA ACCCGGGCGT GACGCTGACC
GAGACCTCGG CCGTCGCGCG CCAGGCCGAG GTGCTGATGA AGCAGGTGCC GGAGGTGACA
CACGTCGGGC GCCGCAGCGG CCGGGCCGAA CTGGATGAAC ACGCCGAGGG CGTGCACGTC
AGCGAGCTCG ACGTGGGGCT CAAACCCACC GCCGAACTCA ACCGCAGCAT GGACGAGATC
AAGGCCGACA TCCGCGCGCG CCTGGTCAAC CTGCCGGCTG CGCTGGAGAT CGGCCAGCCC
ATCTCGCACC GCATCGACCA CATGCTCTCC GGCGTGCGCT CGCAGATCGC GGTCAAGATC
TTCGGCGAGG ACCTCGACGC GCTGCGCGGT CAGGCCGACG CGCTGCGCGC GCGGCTGGCC
ACGATCCCGG GCATTGCCGA CCTGCAGATC GAGAAGCAGG TGCTGGCGCC GCAGATCAAG
GTGCGCATCG ACCCCGCCGC CGCCGCGCAG TACGGCGTGC CCGCGCCGCA GGTGCTGGCG
GCGCTGCAGG CGCTGGTGGA GGGCGAGAAG ATCACCCAGA TCGTCGAGGG CAGCCGGCGC
TTCGCGCTGG TGGTGAAGCT GCCGGAGTCG GCACGCTCGC TGGAGGGGCT GCGCCGGATC
CTGATCGAGA CGCCCAGCGG CCGCGTCCCG CTGTCCCGGC TCGCGAGCAT CGAGGAAGGC
GACGGACCGA ACCAGATCAG CCGCGACGAC GGCAAGCGGC GCATCGTGCT GTCGGCCAAT
GCCTCGGGGC GGGCGCTGTC GGAGATCGTC GCCGACATCC GGCGAATCGT GGCCGACACG
CCGCTGCCGG AGGGCTACTT CATCACCCTG GGCGGCCAGT TCCAGGCGCA GGAGGAGGCC
TCGCGCCTGG TCGGTCTGCT GTCGATCGTG TCGCTGACGC TGATGTTCGT GGTGCTCTAC
AGCCGCTACC GGTCGGCGGC GCTGTCGGCG CTGATCATGG TGAACATTCC GCTGGCCCTG
GTGGGCGCGG TGCTCGGGCT GTGGCTGTCG GGTCAGCCGC TGTCGGTGGC CGCGCTGGTG
GGCTTCATCA CGCTGGCCGG CATCTCGGTG CGCAACGGCA TCCTGAAGGT CAGCCACTAC
ATCAACCTGA TGCGCTTCGA GGGCGAGAAC TTCGACCAGC GGATGATCGT CCGCGGTTCG
CTCGAGCGCC TGAGCCCGGT GCTGATGACG GCGCTGGTCA CCGCCTTCGC GCTGGCGCCG
CTGCTGTTCG AGGCCGAACA GCCCGGCACC GAGGTGCTGC ACCCGGTGGC CGTGGTGATC
TTCTCCGGCC TGATCAGCTC GACCCTGCTC GACACCTTCC TCACGCCCGC GATGTTCTGG
CTGTTCGGCC GCCGATCGGC CGAAGCGCTG ATGGACGACA AGGACGCCGA GGCGCTCTGA
|
|---|
| Protein sequence | MFKWLLDNSL SNRLLVIIAS VVLMAYGAFT LSRTPVDVFP DLNKPTVTVM TEAGGMAAEE
VEQLITFPLE TTMNGLPGVE SVRSTSSAGL SFLYVTFDWR TDIFRARQLV SERLSAMEEG
LAEGVLPRMG PVSSIMGEIL QIAIPVDAAK ISPMAVREYA DWVLRPRLLA VPGVAQVIPI
GGEVRQFQVQ PDTQRMAELG VTHEQLEAAL RGYSSNTSGG FLELNGREVL IRNLGRTSRL
EDLKDLALTA RDGQPLLLRQ IAEVSFAAAL KRGDAGFEGK PAVILGIQKQ PTADTIALTR
ALEEALLGLK SSLPPGMEAP QVTFRQASFI EASITTLQGK LIGASVFVAL ILFFFLGTLR
PTLIALTAIP VSIFITALVF RYFGLSINTM TLGGLAIAIG GLVDDAVVGV ENVLRRLKED
RAKHPDKRLH PIEIVGRATM EVRSAILYAT VIIVLVFIPL FALPGLEGRL FVPLGIAFIV
STLASLVVSV TVTPVLGFYL LPRMKNIDHG DTRVLAWLKA GYRRSLQRVL DRPRAALAAA
ASAVLVAAVA VPFFPTTFLP PFNEGTLLIG LRLNPGVTLT ETSAVARQAE VLMKQVPEVT
HVGRRSGRAE LDEHAEGVHV SELDVGLKPT AELNRSMDEI KADIRARLVN LPAALEIGQP
ISHRIDHMLS GVRSQIAVKI FGEDLDALRG QADALRARLA TIPGIADLQI EKQVLAPQIK
VRIDPAAAAQ YGVPAPQVLA ALQALVEGEK ITQIVEGSRR FALVVKLPES ARSLEGLRRI
LIETPSGRVP LSRLASIEEG DGPNQISRDD GKRRIVLSAN ASGRALSEIV ADIRRIVADT
PLPEGYFITL GGQFQAQEEA SRLVGLLSIV SLTLMFVVLY SRYRSAALSA LIMVNIPLAL
VGAVLGLWLS GQPLSVAALV GFITLAGISV RNGILKVSHY INLMRFEGEN FDQRMIVRGS
LERLSPVLMT ALVTAFALAP LLFEAEQPGT EVLHPVAVVI FSGLISSTLL DTFLTPAMFW
LFGRRSAEAL MDDKDAEAL
|
|---|
| |