| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2631 |
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| Symbol | |
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| ID | 4785856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2806393 |
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| End bp | 2808288 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091202 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001021820 |
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| Protein GI | 124267816 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.898306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCT ATCCCTTGCT GTCCACCATC GACCAGCCGG CCGACCTGCG CGGCCTGTCG
CGCGCCGAGC TCAAGCAACT GGCGCAGGAG CTGCGCGACC ACGTGCTGAC CAGCGTGTCG
CAGACCGGCG GCCACCTGTC GAGCAACCTC GGTACGGTGG AGCTGACGAT CGCGCTGCAC
CACGTCTTCA ACACGCCGCA GGACCGGCTG GTGTGGGACG TGGGCCACCA GACCTATCCG
CACAAGATCC TGACCGGCCG TCGTGACCGC ATGGCCGGCC TGCGGCAGCT CGGTGGCATC
AGCGGCTTCC CGCGCCGTGA CGAGAGCGAG TACGACACCT TCGGCACGGC GCACTCGTCG
ACCTCCATCT CCGCCGCGCT CGGCATGGCG CTGGCGGCCA AGATCAAGGG CGAGGATCGC
CGTTCGGTCG CGATCATCGG CGACGGCGCG ATGACCGCCG GCATGGCCTT CGAGGCGCTC
AACAACGCCG GCGTGTCCGG CGCCAACATG CTGGTGGTGC TGAACGACAA CGACATGTCG
ATCTCGCCGC CGGTGGGCGC GCTGAACCGC TACTTCGCGC GGCTGATGTC CGGGCGCTTC
TACAGCGCGG CCCGCCAGGG CGCCAAGAGC GTGCTGAAGA ACGCGCCGCC GCTGCTCGAG
CTGGCACGCC GCTTCGAGGA GCACGCCAAG GGCATGATCG TGCCCAGCAC CATCTTCGAG
GAATTCGGCT TCACCTACGT CGGCCCGATC GACGGCCACG ACCTCGACTC CCTGATCCCG
ACGCTGGAGA ACCTGCGCGA CCGCAAGGGC CCGCAGTTCC TGCACGTGGT CACGAAGAAG
GGTTACGGCT ACAAGCTGGC CGAGGCCGAC CCGGTGGCCT ATCACGGCCC AGGCAAGTTC
AACCCGGCCG AGGGCCTGAA GAAGGCCGCC CCCGGCAAGC CCAGCTTCAC CCAGGTGTTC
GGCCAGTGGC TGTGCGACAT GGCGGCGAAG GACACGCGCC TGGTCGGCAT CACGCCCGCC
ATGCGCGAGG GCTCCGGCAT GGTGGAGTTC GAGCAGCGCT TCCCGGACCG CTACTTCGAT
GTCGGCATCG CCGAGCAGCA CGCCGTGACC TTCGCCGCCG GCCTGGCCTG CGAAGGGCTG
AAGCCGGTGG TGGCGATCTA CTCCACCTTC CTGCAGCGCG GCTACGACCA ACTGATCCAC
GACGTCGCGA TCCAGAACCT GCCGGTCGTG TTCGCGCTCG ACCGGGCCGG CATCGTCGGC
GCCGACGGTG CCACGCACGC CGGGGCCTAC GACATCGCCT ACGTCCGCTG CGTGCCCCAC
CTCAGCCTGA TCGCGCCGGC CGACGAGAAC GAATGCCGCC AGGCGCTGAC CGCTGCGTTC
GAGCAACAAC ATCCGGTGGC CGTGCGCTAC CCCCGCGGTG CGGGCGTCGG CGTGGCCGTC
CAGTCCGAGC TGACGGCGCT GCCCTGGGGA CGCGGCGAAC TGCGGCGCGA GGCGCGCGGC
GGCGGTCGCC GGATCGCGAT CCTGGCCTTC GGTACGCTCC TCTATCCGGC GCTGGCCGCG
GCCGAGAAGC TCGACGCGAC GGTGGCCAAC ATGCGCTTCA TCAAGCCGCT GGACACGGAA
CTGGTGCTGA GCCTCGCGCG CAGCCACGAG GCCCTCGTCA CGGTGGAAGA GGGCTGCCTG
CAGGGCGGCG CCGGCAGCGC GGTGCTCGAG GCGCTGCAGG CCGCCGGCGT CAACCTGCCG
GTGCTCACGC TGGGCCTGCC CGACGAGTTC GTGGAGCACG GCGACCCCGC CAAGCTGCTG
GCGCAGCTGG GCCTGGACGC CGCCGGCATC GAGCAGAGCA TCCTCAAGCG CTTCGGCGCC
AAGCTCGAGC TGGTGCGGCC GGCGATCAAC GGCTGA
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| Protein sequence | MKSYPLLSTI DQPADLRGLS RAELKQLAQE LRDHVLTSVS QTGGHLSSNL GTVELTIALH
HVFNTPQDRL VWDVGHQTYP HKILTGRRDR MAGLRQLGGI SGFPRRDESE YDTFGTAHSS
TSISAALGMA LAAKIKGEDR RSVAIIGDGA MTAGMAFEAL NNAGVSGANM LVVLNDNDMS
ISPPVGALNR YFARLMSGRF YSAARQGAKS VLKNAPPLLE LARRFEEHAK GMIVPSTIFE
EFGFTYVGPI DGHDLDSLIP TLENLRDRKG PQFLHVVTKK GYGYKLAEAD PVAYHGPGKF
NPAEGLKKAA PGKPSFTQVF GQWLCDMAAK DTRLVGITPA MREGSGMVEF EQRFPDRYFD
VGIAEQHAVT FAAGLACEGL KPVVAIYSTF LQRGYDQLIH DVAIQNLPVV FALDRAGIVG
ADGATHAGAY DIAYVRCVPH LSLIAPADEN ECRQALTAAF EQQHPVAVRY PRGAGVGVAV
QSELTALPWG RGELRREARG GGRRIAILAF GTLLYPALAA AEKLDATVAN MRFIKPLDTE
LVLSLARSHE ALVTVEEGCL QGGAGSAVLE ALQAAGVNLP VLTLGLPDEF VEHGDPAKLL
AQLGLDAAGI EQSILKRFGA KLELVRPAIN G
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