| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2457 |
|---|
| Symbol | |
|---|
| ID | 4785654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2620834 |
|---|
| End bp | 2621400 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640091027 |
|---|
| Product | peptidylprolyl isomerase |
|---|
| Protein accession | YP_001021647 |
|---|
| Protein GI | 124267643 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.85839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.817341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA GAACCTGGGC CGCCTTCGCG CTGGCCGCTG CGGTATTCGC CGCACCGTTG
ACCGCGGCGG CGCAGAAGGT GCGCCTCGCG ACGAGCGAGG GCGACATCGT GCTGCAGCTC
GACCCCGCCA AGGCCCCGAA GACCGTCGAC AACTTCGTCG CCTATGTCAA GAGCGGGCAC
TACGACGGCA CCATCTTCCA CCGCGTGATC GACGGCTTCA TGATCCAGGG CGGCGGCTTC
GACAAGGACA TGAAGGAGAA GAAGACCGGG GCCCCGATCG CGCTGGAGAA CCGCAGCGGC
CTGCGCAACG AGCGCGGCAG CATCGCCATG GCGCGCACCA TGGACCCGAA CTCGGCCACC
GCGCAGTTCT TCGTGAACCT CACCAACAAC GCCTTCCTCG ACCCGGCGAA CTCGCGCGAC
GGCAACGGCT ACGCGGTGTT CGGCAAGGTC ATCGAGGGCA TGGACGTGGT CGACCGCATC
AAGGGCGTGC CCACCACCAA CAAGGGCCCC CACCAGAACG TGCCGGCGAC GCCGGTGCTC
ATCAAGAAAG CCACGCTGGA GCCATGA
|
|---|
| Protein sequence | MISRTWAAFA LAAAVFAAPL TAAAQKVRLA TSEGDIVLQL DPAKAPKTVD NFVAYVKSGH
YDGTIFHRVI DGFMIQGGGF DKDMKEKKTG APIALENRSG LRNERGSIAM ARTMDPNSAT
AQFFVNLTNN AFLDPANSRD GNGYAVFGKV IEGMDVVDRI KGVPTTNKGP HQNVPATPVL
IKKATLEP
|
|---|
| |