| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1745 |
|---|
| Symbol | |
|---|
| ID | 4784203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1871443 |
|---|
| End bp | 1872783 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090315 |
|---|
| Product | putative membrane transport protein |
|---|
| Protein accession | YP_001020939 |
|---|
| Protein GI | 124266935 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.27935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT TCAGCCACGC CCAGCCCCAC CTGCCGTCGT CCAGCGCCGC CGAGCGCGAC
GCGCGGCAGC GCTCCGCCGA TCACCAGAAG GTCGCTCCCG GCGAGATCGC GGTGGGCGTG
GTCATCGGCC GCGCGTCCGA GTACTTCGAC TTCTTCGTCT ACGGCATCGC CTCGGTGCTG
GTGTTCCCGG CGTTGTTCTT CCCCTTCGTC GACCGCCTGC AGGGCACGCT GTACGCCTTC
GTGGTGTTCT CGTTCGCCTT CATCGCGCGG CCGCTCGGCA CCGTGCTGTC GATGGCCATC
CAGCGGCGCT GGAGCCGCGG CACCAAGCTC ACGGTGGCGC TGTTCCTGCT GGGCACCTCG
ACCGCCGGCA TCGCCTTCCT GCCCGGCTAC CAGACGCTGG GCGCGGCCTC GATCGTGCTG
CTGGCGCTGT TCCGCATCGG CCAGGGCGTG GCGCTGGGCG GGTCCTGGGA TGGGCTGCCC
TCGCTGCTGG CGCTCAATGC CCCGCCCGAG CGTCGCGGCT GGTACGCCAT GCTCGGACAG
CTCGGCGCGC CACTGGGCTT CATGCTCGCC AGCGGCCTGT TCGCCTACCT GGTGGCGAGC
CTGTCGACCG CCGACTTCCT GGCCTGGGGC TGGCGCTACC CGTTCTTCGT GGCCTTCGCG
ATCAACGTGG TGGCGCTGTT CGCGCGGCTG CGGCTGGTCG TCACCCACGA ATACGAACGC
CTGCTCGACG AGCGCGAACT CGAGCCCATC GGCGTGCTCG AACTGGTCCG CAGCGAGGGC
CACAACCTGG TGATCGGGGC CTTCGCGGCG CTCGCCAGCT ACGCGCTGTT CCATCTGGTG
ACCGTGTTTC CGCTGTCGTG GGTCACGCTC TACTCGCAGC AGTCGGTGGC CGGCTTCCTG
ACCATCCAGA TCTTCGGCGC CGCACTGGCG GCCGGTGGCA TCGTCGCCTC GGGCTGGATC
GCCGACCGCA TCGGTCGGCG CAGCACGCTG GGCGCTTCGG CGGTGCTGAT CGGCATGTTC
AGCGGCTTCG CGCCCACGCT GCTGGGCGGT GGCCCGCTGG GCCAGGACGT GTTCATGCTG
ATCGGCTTCG CGCTACTGGG GCTGTCCTAC GGCCAGGCGG CCGGCGCGGT GACCTCGAAC
TTCTCGTCGA AGTACCGCTA CACCGGCGCC GCGCTGACCG CCGACCTGGC CTGGCTGATC
GGCGCGGCCT TCGCGCCGCT GGTCGCGCTG GGGCTGTCGG CCCACTTCGG ACTGGCCTAC
GTCAGCATCT ACCTGCTGTC GGGCGCGGCC TGCACGCTGG CCGCATTGAG CCTCAACCGC
GCGCTGGGCC CTCGCGACTG A
|
|---|
| Protein sequence | MSSFSHAQPH LPSSSAAERD ARQRSADHQK VAPGEIAVGV VIGRASEYFD FFVYGIASVL
VFPALFFPFV DRLQGTLYAF VVFSFAFIAR PLGTVLSMAI QRRWSRGTKL TVALFLLGTS
TAGIAFLPGY QTLGAASIVL LALFRIGQGV ALGGSWDGLP SLLALNAPPE RRGWYAMLGQ
LGAPLGFMLA SGLFAYLVAS LSTADFLAWG WRYPFFVAFA INVVALFARL RLVVTHEYER
LLDERELEPI GVLELVRSEG HNLVIGAFAA LASYALFHLV TVFPLSWVTL YSQQSVAGFL
TIQIFGAALA AGGIVASGWI ADRIGRRSTL GASAVLIGMF SGFAPTLLGG GPLGQDVFML
IGFALLGLSY GQAAGAVTSN FSSKYRYTGA ALTADLAWLI GAAFAPLVAL GLSAHFGLAY
VSIYLLSGAA CTLAALSLNR ALGPRD
|
|---|
| |