Gene Mpe_A1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1602 
Symbol 
ID4787226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1729573 
End bp1730559 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID640090170 
Productpyruvate dehydrogenase (lipoamide) 
Protein accessionYP_001020799 
Protein GI124266795 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA AGAACCCGTT CCCTCTGAGC AAGGAAGCGC TGCTGAATTG CTATCGCTCG 
ATGCGCACGA TCCGTGATTT CGAGGAACGA CTGCACGTGG ACTTCGGCCG CGGCGACATC
CCCGGCTTCG TGCACCTGTA CGCCGGTGAG GAGGCAGGCG GCGTGGGCAT CATGAGCCAC
CTGGGCGACG GTGACCGCAT CGCCTCCACG CACCGCGGCC ACGGCCACTG CATCGCCAAG
GGCGTGGACG TCGTCGCGAT GATGAAGGAG ATCTACGGCA AGAAGGGTGG CTGCGGCAAC
GGCAAGGGCG GCTCGATGCA CATCGCCGAC CTGTCCAAGG GCATGATGGG TGCCAACGGC
ATCCTCGGCG CCGGCGCACC GCTGATCTGC GGCGCGGCTC TGGCCGCGAA GTTCCGCAAG
AAGAACGAGG TCGGCATCTG CTTCGTCGGT GACGGCGCCT CCAACCAGGG CACCTTCCTC
GAGAGCCTGA ACCTGGCCGC GGTGTGGACC CTGCCGGTGA TCTTCGTCGT CGAGAACAAC
GGCTACGCCG AATCGACCTC GCGCGACTAC GGCACCGCGG TGGACAGCTA CGTCGACCGC
GCCTCCGGCT TCGGCATGCC CGGCATCACG GTGGACGGCA CCGACTTCTT CGCAGTCTAC
GAGGCCGCCG GCGAAGTGAT CAAGCGCGCC CGTGAAGGCG GCGGCCCCTC GCTGCTCGAA
GTGAAGATGG TCCGCTTCTA CGGCCACTTC GAGGGCGACG CGCAGACCTA CCGCGCCCCG
GGCGAGCTCG ACGACATCCG CACCAACCAG GACTGCCTGC TGAAGTTCAA GGCGCATGTC
ACGAAGGCCG GCGTGATCAG CGCGGCGGAA CTCGAGGCGA TCGACAAGGA AGTGGCCGCA
CTGATCGAAG ACGCGGTGAA GCAGGCCAAG GCCGCCCCGC TGCCCACCGC CGCCGACCTG
CTGACCGACG TGTACGTGTC CTACTGA
 
Protein sequence
MAGKNPFPLS KEALLNCYRS MRTIRDFEER LHVDFGRGDI PGFVHLYAGE EAGGVGIMSH 
LGDGDRIAST HRGHGHCIAK GVDVVAMMKE IYGKKGGCGN GKGGSMHIAD LSKGMMGANG
ILGAGAPLIC GAALAAKFRK KNEVGICFVG DGASNQGTFL ESLNLAAVWT LPVIFVVENN
GYAESTSRDY GTAVDSYVDR ASGFGMPGIT VDGTDFFAVY EAAGEVIKRA REGGGPSLLE
VKMVRFYGHF EGDAQTYRAP GELDDIRTNQ DCLLKFKAHV TKAGVISAAE LEAIDKEVAA
LIEDAVKQAK AAPLPTAADL LTDVYVSY