Gene Mpe_A1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1560 
Symbol 
ID4785610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1683264 
End bp1683770 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID640090128 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001020757 
Protein GI124266753 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.129172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGGCT TCATCATGTC CGCCGCGATG AGTCTCGACG CCTACGACAC GCGCATCCTG 
GCCGAACTGC AGGCCGAGGC CCGGCTGAGC ATGGCCGAGC TGGGCCGGCG CGTCCACCTG
AGCCAGCCCG CCGTGACCGA GCGCGTGCGC AAGCTCGAGG CGGCCGGCGT CATCACCGGC
TACCGCGCCA CGGTCAACCT GCAGGCGCTG GGCTACGGCA TCCGCGCGAT GATCCGCGTG
GGCCGCGCCG AGTACGCGCG GGTGGTGAAG CTGGTGCAGC AGACGCCCGA GGTCATCAAT
GCCTACAACG TGACCGGCGA GGACAGCTGG ATCCTCGAGA TCGCCGTGAT CGACGTGGCG
CATCTCGACG CGGTGGTCAC CAGGTTCTGC ATCCTCGCCG AGACCTCGAC CGCCATCATC
CTCAACCCCG CGCGCGAGCA CCAGCCGATG CTGCCGCCGC GCCGCGAGGA CGTGAAACCC
CCGATCAGGA AAGTGGAGAA CGCATGA
 
Protein sequence
MLGFIMSAAM SLDAYDTRIL AELQAEARLS MAELGRRVHL SQPAVTERVR KLEAAGVITG 
YRATVNLQAL GYGIRAMIRV GRAEYARVVK LVQQTPEVIN AYNVTGEDSW ILEIAVIDVA
HLDAVVTRFC ILAETSTAII LNPAREHQPM LPPRREDVKP PIRKVENA