| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1330 |
|---|
| Symbol | |
|---|
| ID | 4785346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1433658 |
|---|
| End bp | 1434491 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640089896 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_001020527 |
|---|
| Protein GI | 124266523 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.428976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGGC TGGCCGGGAA CGCCTGCATC GCCTCGCTGC TGGCCTGCAC CGCCTCGCTG
CCGGTGGCGG CCCAGGCGCA AAGACCGCTG TGGGAACTGG GACTCGGTGT GGCAGGCCTG
CGCCTGCCGC ACTACCGCGG AGCGAACCAG TCGCACGACT GGCTGCTGCC AGTGCCCTAC
GCCGTGTACC GCGGGAAGAT CTTCAAGGCC GACCGGGACG GTGCACGCGC CGTGCTGTTC
GAGTCGGACC GGCTCGACTT CGACCTGAGC CTCGCCGCCA CCGCGCCGAC GCGCAGCGAG
GACAACGACG CGCGCCGGGG CATGAGCGAT CTCGCGCCGA CGCTCGAGTT CGGACCCAAC
CTGAACTGGA CCGCCGCCCG CGGCACCGGT TGGACCCTGC AGTTGCGAGC GCCCGTGCGC
GCGGCGCTGA CGCTAGAGTC ACGCGCACGC GGGATCGGCT GGACCGCCAC GCCGAATCTC
GGCCTCGATG TCGAGAACGT CGGCAGCTCC GGTTGGAACC TCGGACTGAT GAGCGGTCCG
GTGTTCGGCA GCCGCCGCTT CAACGCTTAC TTCTACGACG TGCCGACGGC CGACGCCACC
GCCGATCGAC CGGCCTACCG CAGCCCCGGC GGCTATGCAG GGGCCCAGGC CACCGCGACG
CTGTCGCGGC GCTTCGAGCG CACCTGGGCC GGACTGTTCG TCCGCCACGA CACGCTGCAC
GGCGCACGCT TCGCCGACAG CCCGCTGGTA CGCCAGCGAG ACAACCTCTC GTTCGGCATC
GTGTTCAGCT GGGTCTTCGC GACCTCGTCC GAGACCGTAT CCTCCGATCG ATGA
|
|---|
| Protein sequence | MRRLAGNACI ASLLACTASL PVAAQAQRPL WELGLGVAGL RLPHYRGANQ SHDWLLPVPY
AVYRGKIFKA DRDGARAVLF ESDRLDFDLS LAATAPTRSE DNDARRGMSD LAPTLEFGPN
LNWTAARGTG WTLQLRAPVR AALTLESRAR GIGWTATPNL GLDVENVGSS GWNLGLMSGP
VFGSRRFNAY FYDVPTADAT ADRPAYRSPG GYAGAQATAT LSRRFERTWA GLFVRHDTLH
GARFADSPLV RQRDNLSFGI VFSWVFATSS ETVSSDR
|
|---|
| |