Gene Mpe_A1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1303 
Symbol 
ID4785025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand+ 
Start bp1411021 
End bp1411626 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content69% 
IMG OID640089869 
Productamino acid transporter LysE 
Protein accessionYP_001020500 
Protein GI124266496 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.520276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.253886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGATT ACGGCGCGTT CGTCGTCACG GTGATCGTTT TCCTGGCGAT CCCGGGCCCG 
GGCAATCTGG CGCTGATCAC CTCCACCGGC AAGGGCGGGC TGCGCGGCGG CTTCGCTGCG 
ACGCTGGGCG TCATCGCCGG CGACCAGTTG CTGATGTGGC TGGCGGTGGC CGGTGTGGCC 
GCGCTGTTGC AGGCCGCCCC GGTGGTGTTC GGCGCGGTGC AGTGGGTGGG CGCCGCCTAC 
CTGGCCTACA TCGGCTGGCG GCTGATCACC AGCCGGCCCG GTGATGCACC GGTGCTGCAG 
ATCCTGCCGC GGCACTACTT CCGCCAAGCC TGCATGATCA CCCTGCTCAA CCCCAAGGCC 
ATCGTGTTCT ACATGGCGTT CTTCCCGCTG TTCGTCGACC CGGCGCGTCA CCAGGGCCTG 
CCGACCTTCG GCCTGATGGC GGCCACGATT GCCGTGCTGA CCTTTCTCTA CGGTGCCATC 
GTGGTCCTGC TGACGCACCG GCTGGCCGAC AGGCTGCGCG CCAGCCCGCG CATCACCAAG 
GCGCTGGAGC GGCTGGCGGG CGCGCTGCTG ATCGGTTTCG GCGTGAAGCT GGTGCTGAGC 
CGGTAG
 
Protein sequence
MADYGAFVVT VIVFLAIPGP GNLALITSTG KGGLRGGFAA TLGVIAGDQL LMWLAVAGVA 
ALLQAAPVVF GAVQWVGAAY LAYIGWRLIT SRPGDAPVLQ ILPRHYFRQA CMITLLNPKA 
IVFYMAFFPL FVDPARHQGL PTFGLMAATI AVLTFLYGAI VVLLTHRLAD RLRASPRITK 
ALERLAGALL IGFGVKLVLS R