| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1082 |
|---|
| Symbol | |
|---|
| ID | 4783685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1155286 |
|---|
| End bp | 1156191 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089644 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020278 |
|---|
| Protein GI | 124266274 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.868958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.280339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACA CGACCCACGA TCTGCGCGCA CGCAATTTCC CCTCGGCCCA AGAAGACGTG
GCCGCGGTCA CGCCGGCCTC GCGCTATGCC GGCCCCGAAA GCGCCTACCG TCTGGCCTTC
GACGACAAGG ATTTCCTGCT GCGCGAGGAA CTGCGCCCGG TGCGCATGCA GCTCGAGCTG
CTCAAGCCCG AGCTGGTGCA GCGCGAGCAC CGCATCGAAT CGACCATCGT GATCTTCGGC
AGCGCGCGCA TCCTGCCGCG CGACGAGGCG CTGCAGCGCG TCGCTGCAGC GCAGGCGCTG
GGCGACGCCG ATGCGCTCAA GCGCGCCGAG ATGCAGCTGG CCATGTCGCA TCACTACGAA
GAAGCACGGC GCTTCGCCGG CATCGTGACG ACGGCCTCGA AGCAGCTCGA CGAGCCGATC
GCCGTCGTCA CTGGCGGCGG GCCCGGCATC ATGGAGGCCG GCAACCGCGG CGCCTTCGAG
ACCGACGGCC CGAGCATCGG CCTCAACATC GTGCTGCCGC ACGAGCAGGC GCCCAACGAC
TACATCACGC CGGAGCTGTG CTTCCAGTTC CACTACTTCG CGCTGCGCAA GATGCACTTC
CTGATGCGCG CGATCGCGCT GGTGTGCTTC CCCGGCGGCT TCGGCACGCT CGACGAGACC
TTCGAGGCGC TGACGCTGAT GCAGACCGGC AAGATCCGCC GTCGACCGGT GCTGCTGTTC
GGTCGCGAGT TCTGGACCAA GCTGATCAAT TTCGACCTGT TGGTCGGCAC CGGCATGATC
AATGCCGAGG ATCTGAAGCT GTTCCACTTC GTCGAGAGCG CCGAAGAGGC CTGGGGCGTG
ATCGAGCGCC ACTACGGGCT CGACGCGCTC GACACCCAGA CCGGCGCCTT CGCGGAAGAC
GTCTGA
|
|---|
| Protein sequence | MDDTTHDLRA RNFPSAQEDV AAVTPASRYA GPESAYRLAF DDKDFLLREE LRPVRMQLEL
LKPELVQREH RIESTIVIFG SARILPRDEA LQRVAAAQAL GDADALKRAE MQLAMSHHYE
EARRFAGIVT TASKQLDEPI AVVTGGGPGI MEAGNRGAFE TDGPSIGLNI VLPHEQAPND
YITPELCFQF HYFALRKMHF LMRAIALVCF PGGFGTLDET FEALTLMQTG KIRRRPVLLF
GREFWTKLIN FDLLVGTGMI NAEDLKLFHF VESAEEAWGV IERHYGLDAL DTQTGAFAED
V
|
|---|
| |