| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0897 |
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| Symbol | |
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| ID | 4787220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 945870 |
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| End bp | 948671 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089458 |
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| Product | ATP-dependent transcriptional regulator-like protein protein |
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| Protein accession | YP_001020094 |
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| Protein GI | 124266090 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.571021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGT CGTCGCCCCA CCGTCAGCTG CGATCGCACC CGCTCGAGGC CACGACGGAC
TGGCCCACGC CGCTGGCCGA CGAGCTGGCC TCGACCGAAC GTGGCTTCCC GTCGGACGTG
CGGATGCACA AGCTGTTCAC GCCGCCGGTG TACCCGGGCG CCGTGCCGCG ACAGGCCATC
CTCGACCGTG TGCTGCAGGA CGACAGCCTG CGCGTCACGG TGCTGCAGGG GCCCGCCGGC
CACGGCAAGT CGACCACCCT GCAGCAGATC AAGACCGCCC ACGAGGCCCG CGGCTGGCGC
ACCGCCTGGC TCACCCTCGA CGACGCCGAC AACGACCCGC GACGCTTCGA GTCGCACCTG
GTCGCGGTGA TGAGCCTGCT GCACGGCCGT GCCGCGTCGC CCGGCGCCTC GCGCAGCGGC
ACCGGCGATG CGCCGCGCGA TCTGGCCGAC TGGATGCTCG ACACCCTGTC GGGCCGCATC
ACGCCGGCCT CGATCTTCAT CGACGAGTTC CAGGCGCTGC GCAACGAGGC CCTGCTGCGC
TTCTTCCGCT CGGTGCTCGC GCGCCTGCCG GCCAACGTGC ATGTGTTCAT CGGCTCCCGC
ACGCTGCCGG AGATCGGCCT GGCCACGCTG ATGGTCAACC GTGTGGCGTC GGTGGTGCGG
GCCGACGACC TGCGCTTCAC GCCGGGCGAG GTGACGCAGT TCTTCGCCGA TTCGGCCAGC
CTGCAGGTCA GCGCCGGCGA GGTGGACGCG ATCTACCGCC GCACCGAGGG CTGGCCGGCC
GGCGTGCAGC TGTTCCGGCT GGCGCTGGTG AGTCCCGAGG TGCGCATGGC GCTGGACGGC
GCCGACGACC ACGGGCCGCG CGAGCTGGCC GAATACCTGG CCGACAACGT GATGTCGCTG
CAGTCGCCGC GCATGCAGGA GTTCCTGCTG AAGACCTCGC TGCTGCAGCG CCTGTCGGCA
CCGCTGTGCA CCGCCGTGAC CGGCTTCGAG GACGCGCAGG AGCTGCTGGT GCGGCTGGAG
CGCTCCGGCC TGTTCCTGCG CGCGCTCGAC TCCGACAACC GCTGGTTCCG GTACCACGGC
CTGTTCTCGA CCTACCTGGC CGAGACCCTG CAGCGCAACG GCCCCGAAGC GCTGCGGCAG
GTGCACAAGA AGGCGGCGCA GTGGTGCCTG GCGCACGAGC TGCCCGAGGA AGCGATCCAC
CACGCGTTGT GCTGCAGGAA CTTTCCGCTC GCGGCGTCCA CGCTGACCGA CTGGTCGTCG
CAGCTGGTGG CCGGGGCCGA GCTGATCACG CTGGAGCGCT GGCACGACCG CCTGCCCTTC
CACGAGGTGG CGCAGCGGCC GGCGCTGGTG ATCCGCGCCG CCTATGCGCT GATGTTCCTG
CGCCGCCGCC CCAAGCTGCG GCCGCTGCTG GAGCTGATGG CACCGCAGGC CGGCGGCGGC
GACATCGTGC CGACCACCAA CCCCGACCTG TGCCGCGCGA TGTCCTTCCT GCTGGTGGAC
GACGACATGG CGGCGGCGGC CGACACCGTC GAGCAGGCCG GCGTGGTGCA GCGCGAGCTG
GAGGGCTTCC CGGCCTTCGA GCTGGGAGCC GCCGCGAACG TGCTCGCGCT GGGCAAGGTG
GCCAGCGGCG ATTTCGAGGG CGCGCGGCAG GCCCTGGCGC TGGCGCGTGC ACACCTCGGT
CGCGGCGGCG GCTCGTTCGT CGGCGGCTAC ACCGCCGCCA TCACCGGCAG CAACCTGCTC
GTGCAGGGCC GGCTGCAGGA GGCGCTGGCG CACCTGCGCG ACGAGAACGC GCAGGAGGCG
CCGCTCGACA CCTCGGTGGC CGGTGCGGCG CTCGCGGCCT GCCACATGTT CGCGCTGTAC
GAGGCCAACG ACCTGGCGAC GCTGGAGTCG CTGGCGCACC GCTTCCAGCG CGAGATCTCC
GAGTCGGTGA CGCTCGACTT CATCGCCGCG GCCCACATCG CCATCTCGCG CATGCACGAG
GCGCGCGGGC GCTCCGACGA GGCCGTCGCG GTGCTCGACG AACTGGAGCG CATCGGCCAC
ACCAGCCCCT GGCAACGCCT GGTGGCGGTG AGCGAGTGGG AGCGCGTGCG GCGTGCGCTG
GCGGGCGGCG AGATCGAGCG CGCGGTGGCG CTGGCGACGC GCATCGCCCC GGACTCGCGC
GACGACGCGC CGCACTGGAT CCACCTGGCC GAGGACGTGG AAGGCTCGGG CTACGGGTGG
ATCCGCCTCG CCATCGCGCG GCACGACCAC GCCGACGCCG CGCAGCGCAT CGCCCGGGAG
CGGGCGCGCC AGACCGGTCG GGTCTACCGC GACATCAAGC TGAGCGTGCT GGAGACCCTG
CTCCAGCAAC GCATGGGCGC CCGTAACGCC GCCCATCGCT GCCTGCGCAA GGCGCTGCAG
CTGGGCCGAC GGGGCCGCTA CGTGCGCTGC CTGCTCGACG AGGGGGACGG CGTCATCGAG
CTGCTGCGCG AGGCCTACCA GAACCTGCTG CGAGGTCACG AACCGGGCGG CGGCACCGGT
ACCGACCCGG ACCGCGACTA CATCGAGCTG CTGCTCGAGG CCTCGGGGAC CGACCTGGGC
CGCCAGGCCG CCGGCAACGC CCTGACCGAG GCACTGTCGG AGCGCGAAAA GGAGATGCTG
CGTTTCCTGC TCGACGGCAC CACCAACCGC GAGATCGCCG GACGGCTGTT CGTATCGGAG
AACACCGTCA AGTTCCACCT GAAGAACATC TACTCCAAGC TCGGCGTCGG CAACCGATTG
CAGGCCATCA ACACGGCGCG GGCGCTGCGG TTGATCGACT GA
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| Protein sequence | MPPSSPHRQL RSHPLEATTD WPTPLADELA STERGFPSDV RMHKLFTPPV YPGAVPRQAI
LDRVLQDDSL RVTVLQGPAG HGKSTTLQQI KTAHEARGWR TAWLTLDDAD NDPRRFESHL
VAVMSLLHGR AASPGASRSG TGDAPRDLAD WMLDTLSGRI TPASIFIDEF QALRNEALLR
FFRSVLARLP ANVHVFIGSR TLPEIGLATL MVNRVASVVR ADDLRFTPGE VTQFFADSAS
LQVSAGEVDA IYRRTEGWPA GVQLFRLALV SPEVRMALDG ADDHGPRELA EYLADNVMSL
QSPRMQEFLL KTSLLQRLSA PLCTAVTGFE DAQELLVRLE RSGLFLRALD SDNRWFRYHG
LFSTYLAETL QRNGPEALRQ VHKKAAQWCL AHELPEEAIH HALCCRNFPL AASTLTDWSS
QLVAGAELIT LERWHDRLPF HEVAQRPALV IRAAYALMFL RRRPKLRPLL ELMAPQAGGG
DIVPTTNPDL CRAMSFLLVD DDMAAAADTV EQAGVVQREL EGFPAFELGA AANVLALGKV
ASGDFEGARQ ALALARAHLG RGGGSFVGGY TAAITGSNLL VQGRLQEALA HLRDENAQEA
PLDTSVAGAA LAACHMFALY EANDLATLES LAHRFQREIS ESVTLDFIAA AHIAISRMHE
ARGRSDEAVA VLDELERIGH TSPWQRLVAV SEWERVRRAL AGGEIERAVA LATRIAPDSR
DDAPHWIHLA EDVEGSGYGW IRLAIARHDH ADAAQRIARE RARQTGRVYR DIKLSVLETL
LQQRMGARNA AHRCLRKALQ LGRRGRYVRC LLDEGDGVIE LLREAYQNLL RGHEPGGGTG
TDPDRDYIEL LLEASGTDLG RQAAGNALTE ALSEREKEML RFLLDGTTNR EIAGRLFVSE
NTVKFHLKNI YSKLGVGNRL QAINTARALR LID
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