| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0279 |
|---|
| Symbol | |
|---|
| ID | 4786948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 303464 |
|---|
| End bp | 305785 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640088831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001019476 |
|---|
| Protein GI | 124265472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0968275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC CAGCCGCCCC ATCCGCCCTG GCCGCTCAAG CGCGGCGGGT GTATATGGAG
TCGCTGCTGC TCGCGGTGCC GACCGCGGTG CAAGGGGTGC TCGACGGTGC CCACCGACTG
GCGAACGAGA AGGCCGAACC GCAGCTGGCG CACAAGCGCA TGAACGCGGC CATCGACCTG
ACCCGACCCG CACCGCAGTG GCAGCAGGCG CTGATCGACA GCCTCGGTGC CATGCCGCGC
ATCAGCACCT CGGGCGGCAG GACGTCGCTC GGCGCAGCTG CGGCGTCCAG CATGGGCAGT
GGGCGCGACA CGCTGCAACT GGTCGACGAC GACACCATCG AGGTGGAAAT CCTCAGCTCT
CGCCTGGCGC TGGCCATGAT GGACAAGGCT TCGTGGGAGT TCACGGACCT GCGCGCCCGC
ATGTCCAGCC TGGAGCGTCG CGAGGAACTC GACAGTGGCG ACGCGCTGCG ACCGCATGTG
GTGGCACGTA TCGTGATCGA CAGCTGGCGG TCGGCCGGCC TGTCGCTGGA GCACTGGCGG
ACCGTGCAGA AGGTGATCCA CGCGGCCTTC GGCGAGATGG TCGAGGAGTC CTACCACGAG
ACCAACCGCT GGCTGCTCGG TGAGGGCGTG CGTCCCGAAA TCGACCTGCG GCCCCTGATC
CGCCGCTCGA CCGGCGCACA TGTCGCGTCG ATCCCGGTGA CGACGGGCTT CGGCGACATG
GCGGAGGCGC AGGGCGGCCT GCGGCGCGCG AATGTCGTCA TTGCCGGCAC GACGACGTCG
ACCCGCGGGG CCGGTGTCGG CGAGGAAACC CGGTTGATGA CGCGCATGAG CAATCTGGCT
CGTACGGCCG GGCATGCGGA AGCGGTGCTG GGTCGACTCA ACAAGCTGGT GGGCCGGCAG
GTGCCATCGT TCGCCGACAC GGCGGAGATG CAGCCCTCAA CTGGTTTCAA GCGGGCGATC
GCGGAAGCGC AGAGCGGCAT CCAGCGCCAA CTGGCCACCA CCGGACGCGA CGAGCGCGCC
GCGATCAGCA CCCCGGCGCT GCTGCAGGAG TTGCAGCAGC GCAAGCAGGC ACTCAAGGAA
GCCGCCAGCA CGCCGGTCGA GCGCGCCACC ATCGAGATCG TGGCGTTGCT GTTCCAGAGT
ATCCTGACTG AAGAGAAGAT CCCGGCGGTT GTTCGCGTGT GGTTCGCTCG CCTGCAGATG
CCGGTGCTGC GCGTGGCGGT CAGCGAGCCC GATTTCTTCG CCACCACCGA CCATCCGGCG
CGCAAGCTGA TCGACCGCAT GGGCGCCTGC GTGATGGGCT TCGACATCAG CTCGCGGGCC
GCGGGCGATG CGCTCGACAA GGAAATCAAG CGCGTCGTGC AGGTCGTGGA GGCCTACCCC
GACACCGGTC GTCGGGTGTT CCAGACCGTC CTGACCGAGT TCGAGCGCTT TCTCGAGCAT
TATTTCAAGA CCGAGAACGA GGCGACGCGC AAGGGTGTGT CGCTCGCGCA GCAGGTCGAG
CAGCGCGAGA CGATGGCGAT CCAGTACACG ATCGAGCTGC GCAAGATGCT CAACGAGGTG
CCGGTGCAGG AAGGCGTGCG CAACTTCCTG TTCCATGTCT GGGCCGATGT GCTGGCCACG
ATGGCGCTGA AGACGGGAGC CGCCAGCGAT GCCACCAAGA TCATGAAGCG CGCTGCCGCC
GATCTCATCT GGTCGGCGGG TGCAAAGGTG TCGCGTGAAG AACGCGCCGA CGTGATTCGC
CGCCTCCCGC CGCTGCTGAA GACGCTGCGC GAAGGCATGG CGGAGGCTGG CCTCGCTCCC
GAGAAGCAGG ACGAGCACAT CCAGGCGCTG AACGACTCGC TGGCGGCGGC CTTCACTGCC
AAGGCGGCAG CGATTCCCGC CGAGCGTCTC GAGGAGTTGA TGGCGCGACT CGAGGACCTC
GAGGAAATGC TGCCCGATGC CGACGAGATG CAGATCGACG AGTCCATCGT GATGGACCTG
TCAGGGCATG AAAGCACCGA ACTGCAGATC GTGACTGAGG GGGGATCGAT GCCGACGCCA
GCCATGATCG CCTGGGCGCG CGAACTGCAG GTCGGCGGTT GGTACATGCT CGAGCACCGG
GGTCGCATCG AGTCGGTGCA ACTGGCCTGG CATGGCATGC GGAAACAACT CAGCCTGTTC
GTCTCGCAGC AGGGCCGCGG CACGCTGTTC CAGCAGCACC GGCTGGCGTC CTATCTGCAG
GCCGGCCTGC TGGTTCCGGC GCAAGATGAG GCCCTCACGG TGCGCGCGAC CCGCAGCGCG
CTGGCCAAGC TAGACGCTGA CCCGCAGCGC TTGCTGAACT GA
|
|---|
| Protein sequence | MATPAAPSAL AAQARRVYME SLLLAVPTAV QGVLDGAHRL ANEKAEPQLA HKRMNAAIDL
TRPAPQWQQA LIDSLGAMPR ISTSGGRTSL GAAAASSMGS GRDTLQLVDD DTIEVEILSS
RLALAMMDKA SWEFTDLRAR MSSLERREEL DSGDALRPHV VARIVIDSWR SAGLSLEHWR
TVQKVIHAAF GEMVEESYHE TNRWLLGEGV RPEIDLRPLI RRSTGAHVAS IPVTTGFGDM
AEAQGGLRRA NVVIAGTTTS TRGAGVGEET RLMTRMSNLA RTAGHAEAVL GRLNKLVGRQ
VPSFADTAEM QPSTGFKRAI AEAQSGIQRQ LATTGRDERA AISTPALLQE LQQRKQALKE
AASTPVERAT IEIVALLFQS ILTEEKIPAV VRVWFARLQM PVLRVAVSEP DFFATTDHPA
RKLIDRMGAC VMGFDISSRA AGDALDKEIK RVVQVVEAYP DTGRRVFQTV LTEFERFLEH
YFKTENEATR KGVSLAQQVE QRETMAIQYT IELRKMLNEV PVQEGVRNFL FHVWADVLAT
MALKTGAASD ATKIMKRAAA DLIWSAGAKV SREERADVIR RLPPLLKTLR EGMAEAGLAP
EKQDEHIQAL NDSLAAAFTA KAAAIPAERL EELMARLEDL EEMLPDADEM QIDESIVMDL
SGHESTELQI VTEGGSMPTP AMIAWARELQ VGGWYMLEHR GRIESVQLAW HGMRKQLSLF
VSQQGRGTLF QQHRLASYLQ AGLLVPAQDE ALTVRATRSA LAKLDADPQR LLN
|
|---|
| |