| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0168 |
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| Symbol | |
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| ID | 4784131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 179396 |
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| End bp | 182167 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640088716 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_001019365 |
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| Protein GI | 124265361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.616802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAG CTGCTGCTCC TGATTTCTCG AACGTGCCGC CGATGCGCCT GTCCGGCCTG
GAGCCGGTGG CCATCGGCGA GCGCTCGCTG TTCGTCAACA TCGGCGAACG CACCAACGTC
ACCGGCTCCA AGGCCTTCGC GCGGATGATC CTCGGCGGGC AGTTCGAGGA GGCGCTGGCC
GTGGCGCGCC AGCAGGTCGA GAACGGCGCG CAGGTGATCG ACATCAACAT GGACGAGGCC
ATGCTCGACA GCAAGGCCGC GATGGAGCGC TTCCTGAAGC TCATCGCCTC CGAGCCCGAG
ATCGCGCGCG TGCCGATCAT GATCGACAGC TCGAAGTGGG AGGTGATCGA GGCCGGGCTG
AAGTGCATCC AGGGCAAGGG CATCGTCAAC TCGATCTCGA TGAAGGAAGG CGAGGACGCC
TTCCGCCACC AGGCGAAGCT GGTGCGCCGC TACGGCGCCG CCGCCGTGGT GATGGCGTTC
GACGAGCAGG GCCAGGCGGA TACCTTCGCG CGCAAGATCG AGATCTGCGA GCGGGCCTAC
CGCATCCTCG TCGACGAGGT GGGATTCGCG CCCGAGGACA TCATCTTCGA CCCCAACATC
TTTGCCATTG CGACCGGCAT CGAGGAGCAC GACAACTACG CGGTCGATTT CATCGAGGCC
ACGCGCTGGA TCAAGCAGCA CCTGCCGGGC GCCAAGGTGT CGGGCGGCGT GTCCAACGTG
AGCTTCAGCT TCCGCGGCAA CGAGCCGGTG CGCGAGGCCA TCCACACGGT CTTCCTGTAC
CACGCGATCC AGGCCGGCAT GGACATGGGC ATCGTCAACG CCGGCATGGT GGGCGTGTAT
GACGACCTGG ACGCCGAGCT GCGCGAGCGC GTCGAGGACG TGGTGCTGAA CCGCAAGCCG
GCCTACAAGC CGGGCGAGGC GCAGCTGTCG CCGGGCGAGC GGCTGATCGA GATCGCCGAG
CGCGCCAAGG GCGCGGCCAA GGACGACAGC ACCCGCCTCG CGTGGCGCGC CGGCACCGTG
AACGAGCGGC TGTCGCATGC GCTGATCCAC GGCATCACCG ACTTCATCGT CGTCGACACC
GAGGAGGCCT GGCAGGCGAT CCGGGCCGAC GGCGGGCGGC CGCTGCACGT GATCGAGGGG
CCGCTGATGG CCGGCATGAA TGTGGTCGGC GACCTCTTCG GCCAGGGCAA GATGTTCCTG
CCGCAGGTGG TGAAGAGCGC GCGCGTGATG AAGCAGGCGG TGGCGCACCT GCTGCCCTAT
ATCGAGGAGG AGAAGAAGGC GCTGATCGAT GCCGGCGGCG AGGCCAAGGC CAAGGGCAAG
GTGGTGATCG CGACGGTGAA GGGCGACGTG CACGACATCG GCAAGAACAT CGTCACCGTG
GTGCTCCAGT GCAACAACTT CGAGGTCGTC AACATGGGCG TGATGGTCGC GTGCCAGGAC
ATCCTCGCGA AGGCCAAGGT CGAGGGCGCC GACATCATCG GCCTGTCGGG CCTGATCACG
CCCAGCCTCG AGGAAATGCA GCACGTGGCT GCCGAGATGC AGCGCGACGA CTACTTCCGC
GTGAAGAAGA TCCCGCTGCT GATCGGCGGG GCCACCTGCA GCCGGGTCCA CACCGCGGTC
AAGATCGCCC CCAAGTACGA AGGCCCGGTG GTCTACGTGC CTGACGCCTC GCGCAGCGTG
GGCGTGTGCA GCGAGCTGCT GAGCGACGAG CGGGCCGCGA AGTACATCGA GGAACTGAAG
GTCGACTACG ACAAGGTGCG CCTGCAGCAC GCAAACAAGA AAGCCACGCC GATGGTCTCG
CTGGCCGCGG CACGGGCCAA CAAGACGCCG ATCGACTGGC GCGGCTACGC GCCGCCGCAA
CCGAAGTTCG TCGGCCGCCG CGTGTTCAGG AACTACGACC TGGCCGAGCT CGCGCAGCAG
ATCGACTGGG GCCCGTTCTT CCAGACCTGG GACCTGGCGG GCGCCTTCCC GCAGATCCTG
CGCGACGAGG TGGTCGGTGC CGAGGCGCAA CGCGTGATGA GCGACGGCAA GCGCATGCTG
CAGCGGCTGA TCGAGGGCCG CTGGCTGCAG GCGCACGGCG TGATCGGCCT GTACCCGGCC
AACACGGTGA ACGACGACGA CATCGAGATC TACACCGACG AGACGCGCCG CGAGGTGCTG
ATGACGTGGC ACGGTCTGCG CATGCAGACC GAGCGGCCGG TGGTCGACGG CGTGAAGCGG
CCGAACCGCT GCCTGGCCGA TTTCGTCGCC CCGAAGTCGA GCGGGCTGGC CGACCACGTC
GGCCTGTTCG CGGTGACCGC CGGCCATGGC GTCGACAAGA AGGAGGCGGC CTTTCTGGCC
GACCATGACG ACTACTCCGC GATCATGCTG AAGGCGCTGG CCGACCGGCT GGCCGAGGCC
TTTGCCGAGC GCATGCACCA GCGCGTACGC ACCGATTTCT GGGGCTACGC GGCCGATGAG
GCGCTCAGCA CCGAACAGCT GATCGCCGAG CAGTACCGCG GCATCCGCCC CGCACCTGGC
TATCCGGCCT GCCCCGACCA CACCGTCAAG CGCGACATGT TCCGCGCGCT GCAGTGCGAG
GAGATCGGCA TGACGCTGAC CGAGAGCCTC GCGATGACGC CGGCCGCCAG CGTCAGCGGC
TTCTACCTCG CCCACCCCGC TGCGGCCTAC TTCAATGTCG GCAAGATCGG AGAGGACCAG
TTGCGCGACT GGGCGGGCCG GACGCAGCAG GAACTGGCGC AGGCAGAGCG CGCCCTCGCC
CCGCTGATGT AA
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| Protein sequence | MSTAAAPDFS NVPPMRLSGL EPVAIGERSL FVNIGERTNV TGSKAFARMI LGGQFEEALA
VARQQVENGA QVIDINMDEA MLDSKAAMER FLKLIASEPE IARVPIMIDS SKWEVIEAGL
KCIQGKGIVN SISMKEGEDA FRHQAKLVRR YGAAAVVMAF DEQGQADTFA RKIEICERAY
RILVDEVGFA PEDIIFDPNI FAIATGIEEH DNYAVDFIEA TRWIKQHLPG AKVSGGVSNV
SFSFRGNEPV REAIHTVFLY HAIQAGMDMG IVNAGMVGVY DDLDAELRER VEDVVLNRKP
AYKPGEAQLS PGERLIEIAE RAKGAAKDDS TRLAWRAGTV NERLSHALIH GITDFIVVDT
EEAWQAIRAD GGRPLHVIEG PLMAGMNVVG DLFGQGKMFL PQVVKSARVM KQAVAHLLPY
IEEEKKALID AGGEAKAKGK VVIATVKGDV HDIGKNIVTV VLQCNNFEVV NMGVMVACQD
ILAKAKVEGA DIIGLSGLIT PSLEEMQHVA AEMQRDDYFR VKKIPLLIGG ATCSRVHTAV
KIAPKYEGPV VYVPDASRSV GVCSELLSDE RAAKYIEELK VDYDKVRLQH ANKKATPMVS
LAAARANKTP IDWRGYAPPQ PKFVGRRVFR NYDLAELAQQ IDWGPFFQTW DLAGAFPQIL
RDEVVGAEAQ RVMSDGKRML QRLIEGRWLQ AHGVIGLYPA NTVNDDDIEI YTDETRREVL
MTWHGLRMQT ERPVVDGVKR PNRCLADFVA PKSSGLADHV GLFAVTAGHG VDKKEAAFLA
DHDDYSAIML KALADRLAEA FAERMHQRVR TDFWGYAADE ALSTEQLIAE QYRGIRPAPG
YPACPDHTVK RDMFRALQCE EIGMTLTESL AMTPAASVSG FYLAHPAAAY FNVGKIGEDQ
LRDWAGRTQQ ELAQAERALA PLM
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