| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2794 |
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| Symbol | |
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| ID | 7271380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 2919466 |
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| End bp | 2921649 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643571379 |
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| Product | ski2-like helicase |
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| Protein accession | YP_002467772 |
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| Protein GI | 219853340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00114406 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0559482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAG CATCATTGCC GGTGCCCGCG CCGCTTATTG AGTACTGTGA AGAGAAGGGA
ATCACTGACC TTTACCCTCC ACAGGCCGCC TGTGTCGACG AAGGAATCTT CTCCGGGAAG
AGTTTGCTCG TGGCGATACC GACCGCGAGC GGCAAGACGC TGGTCGCCGA GCTGGCCATG
CATGCCCAGG TCGCCAATGG CGGGAAATGC CTGTATATCG TACCGCTCAG AGCGCTGGCT
GGCGAGAAGT TTCGGGAGTT CTCAGGAAAG GGGGTGAAGG TCGGGATCTC CACTGGAGAT
CTCGACCGGC GCGACGAATT TTTGGGTGCC AACGATATCA TCATCGCCAC CTCCGAGAAG
GTCGACTCGC TCCTCCGGAA CAAAACTCCG TGGCTTCGGC AAGTGACACT GCTGGTCGTA
GATGAGGTTC ATCTGATCGC GTCGCCCGAC CGCGGCCCCA CGCTGGAGAT GGTAATCACT
AAGCTCCGGT ACAGAATCCC GAACCTGCAG GTGATCGCCC TCTCTGCAAC CATCGGAAAC
CCGAAGAAGC TGGCTGACTG GCTCGGGGCC GGGCTCGTCA CCAGCGAGTG GCGGCCAGTG
GACCTCCGGC AGGGGGTTTT CTATCGAGGG AAGATCCACT TCCACCAGGG GGAACGGGAG
GTGGCTGAAC CCTCCAAGAC CGAGGATCTG AACCTCTGCA TTGATACAAT CGAGGAGGGA
GGGCAATGCC TGGTCTTCGT CAACTCCCGA CGGAACGCCG AAGGGTTTGC GAAACGAGCC
GCCGCAGCGT TCAAGAAGAG GGTGAAGAGT CCTGTTCTGG AGGAGTACGC GGCCCGGATC
CTCGAATCGG CCACCACTGA CCAGGAGAAG GTGCTCGCAG CCTGCATCGC AACCGGGTCG
GCCTTCCACC ATGCCGGCCT CAGGCGCGAG TTTCGGGAAC TCATAGAGGA AGGGTTCCTG
AAGGGGGAGA TCCGATGTAT CTCCTCAACC CCGACCCTGG CGGCCGGGCT GAACCTGCCG
GCGAGAAGAG TGATCATCAG GGACCTGCTG CGATTCTCTG GGGCCGAAGG GATGGCTCCA
ATCCCAGTCG GCGAGTATCA CCAGATGGCC GGCAGGGCCG GGCGGCCGCA CCTGGACCCG
TACGGTGAAG CCGTGATGAT TGCCAAGAAC GAGCAGTCGA TCGAGGAACT CTTCGAGCGT
TACATCGACG CCCCGGCCGA ACCGGTCGTC TCCCAGTGCA CCCGATCGGG TGCCCTCTGC
TCGCACCTCC TCTCGCTGAT CGCAACGGGG TTCGCCACGG ATCGGAAGGG CCTCAGCAAA
TTTCTGGTCC AGACTTTCTA CGGGTTTACC CACGCCAGCA CAAAAGCCCT GGATACGATC
GTCAATCAGT CGCTCAAGTT CCTGACAGAG ACCGAAATGA TCACTGAGAT CGGCGATCTC
CTCCAGGCGA CCGAATACGG GGCACTTGTC TCGAGACTGT ACATCGACCC GCTCAGCGCC
GAGGCGATCT CTGGAGCGAT GCTGGAGGCC GATGGCTACT CCGATCGGGC CCTGTTGCAG
GTGGTCTGCA GTACCTCAGA CATGCCAGCC CTGTACCTGA AGAGCAAGGA TCTCCAGTAC
CTGGAGAAGT TCCTGTACGA ACACGGGGAC GACCTCTGGC AGCAGGTCCC CTGGGAGGAC
CGCGAGCAGT TCTACCGCTC GGTAAAGACT GCGATGCTCC TCAGTGACTA TACCGACGAG
GTGCCCGAGG CGATCATCTG CGAGCGGTAC GATGTTGGTC CCGGCGACCT CTATGCGGCG
GTCACCAATG TGACCTGGCT GATCCATGCC GCCGCCCGGC TGGCCGCGAT GTTCAGGGAG
GACCTGGCGC CGGCGGTGCG GGAGCTTGAA ATCTGTACTT CTCAGGGGAT CCGGCGCGAG
CTCCTGCCAC TGGTCAGGCT GAAAGGGATC GGGCGGGTCC GCGCCCGCCG GCTCTTCAAC
AACGGGATCA CCGATCCTGC TACACTGCAG GAGGCCGGAT TCGACAGGAT CACCTCGATC
CTCGGATCAG GAGTTGCGAA GTCCCTCTTT TCACAGTTCG ATGAGAAGGA GACGAAGGAA
CGGAAGGACG ATCTCCAGGG ATCATCTGAA CTGGTGAAAA AAGCACAGAC CTCACTCTTT
GGATTTGGTG GCTGCGATGA GTGA
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| Protein sequence | MKIASLPVPA PLIEYCEEKG ITDLYPPQAA CVDEGIFSGK SLLVAIPTAS GKTLVAELAM
HAQVANGGKC LYIVPLRALA GEKFREFSGK GVKVGISTGD LDRRDEFLGA NDIIIATSEK
VDSLLRNKTP WLRQVTLLVV DEVHLIASPD RGPTLEMVIT KLRYRIPNLQ VIALSATIGN
PKKLADWLGA GLVTSEWRPV DLRQGVFYRG KIHFHQGERE VAEPSKTEDL NLCIDTIEEG
GQCLVFVNSR RNAEGFAKRA AAAFKKRVKS PVLEEYAARI LESATTDQEK VLAACIATGS
AFHHAGLRRE FRELIEEGFL KGEIRCISST PTLAAGLNLP ARRVIIRDLL RFSGAEGMAP
IPVGEYHQMA GRAGRPHLDP YGEAVMIAKN EQSIEELFER YIDAPAEPVV SQCTRSGALC
SHLLSLIATG FATDRKGLSK FLVQTFYGFT HASTKALDTI VNQSLKFLTE TEMITEIGDL
LQATEYGALV SRLYIDPLSA EAISGAMLEA DGYSDRALLQ VVCSTSDMPA LYLKSKDLQY
LEKFLYEHGD DLWQQVPWED REQFYRSVKT AMLLSDYTDE VPEAIICERY DVGPGDLYAA
VTNVTWLIHA AARLAAMFRE DLAPAVRELE ICTSQGIRRE LLPLVRLKGI GRVRARRLFN
NGITDPATLQ EAGFDRITSI LGSGVAKSLF SQFDEKETKE RKDDLQGSSE LVKKAQTSLF
GFGGCDE
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