Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_2762 |
Symbol | |
ID | 7270872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 2890578 |
End bp | 2891840 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643571351 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_002467744 |
Protein GI | 219853312 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.735424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCC TCTCTTCTCT TTGCACCAGC ACCGGTGCCT GTATCAGCGC TCTTCACAGC CTTGTTGGGA AGGATGTCTA CCTGGAGGAG TATGGGTGCA CCTTCAACCA CGCCGATACC CTGGCGTTGG TCGAGGTGCT GAAGGCGCAG GGGTGTACGA TCGTCCCCAC ACCTGAGGAG GCGGATGCCG TGGTGCTGAA CACCTGCACC GTCATCGGCC CGACCGAACG GCTGATGCTC AGGCAGATGC GTCGGTACAG CGGCCATGAC CTTTATCTGA CCGGGTGTAT GCCGGCCGTG CAGATGGATG CGATCTGTGA GGTCTGTTCC CCTAAGGTGA TCCCCCCAGA GGAGATCCGG GCGGCCTATA CCCTTGTGAA CACTACGGTT CCGTCGGCGA TAGGGGTCGT GCAGGTGGGG CAGGGGTGTG CCGGTCGGTG TTCCTACTGC ATCACCAGAA ATGCCCGCGG GCCGCTCCAG TCGTTCCAGC CGCCGGATAT CTACAACAGG GTGCAGCAAG CGGTCGATAA CGGGGCTGTC GAGGTGCAGC TGACCGGTCA GGACCTCTCC TCGTGGGGGC TCGACCTCGG GCGGAGCCTC CCCGACCTTC TTCGGGGAAT CACGGCGTTT CCGGGTGATT ACCGTCTCAG GCTCGGGATG ATGAACCCGG CCACGGTTCT CCCTATCTTG GATGATCTGA TTGCAGCCTA CCAGTCGGAC CGAATCTTCC AGTTCCTTCA CCTCCCGATC CAGTCGGGCT CGGATCGGGT GTTGGCTGCG ATGAACCGGA GTTACACCGC CTCCGACGTT CAGCAGATCC TAAGAGCGTT TCGTGAGGTC CATCCTGACC TCACCCTGAT GACCGACCTG ATCGTCGGGT TTCCCGGCGA GACCGATCAG GACTTTGAAG AGACCCTGCA GATGATCACC GCTCTCTCTC CGAACAAGGT GAACATGACC AGGTACTCAG GGAGGCCTGG CACTCCCGCA GCCGACCTGC CAGATCTGCA GGACTCGGTG AAGAAGGATC GGTCACGGGC TGTTAACGAC CATGTTACTA CACTCTACCA CCAGAAGAAC AGTCGGTGGA TTGGAGAGGA GGTCGGCGTC GTCGTCACCG AGCAGCGCAA GCTAGGCTCG GTGATCACCC GGGACGAGCG TTATCAGAAC ATCGTCATCC CGGAACCCCT CCCCTTTGGG ATGAAGTGCA GGGTACAGAT CGAGCAAGAT TGCACCTACT ACTTCATCGG TTCCCTGGTC TGA
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Protein sequence | MQRLSSLCTS TGACISALHS LVGKDVYLEE YGCTFNHADT LALVEVLKAQ GCTIVPTPEE ADAVVLNTCT VIGPTERLML RQMRRYSGHD LYLTGCMPAV QMDAICEVCS PKVIPPEEIR AAYTLVNTTV PSAIGVVQVG QGCAGRCSYC ITRNARGPLQ SFQPPDIYNR VQQAVDNGAV EVQLTGQDLS SWGLDLGRSL PDLLRGITAF PGDYRLRLGM MNPATVLPIL DDLIAAYQSD RIFQFLHLPI QSGSDRVLAA MNRSYTASDV QQILRAFREV HPDLTLMTDL IVGFPGETDQ DFEETLQMIT ALSPNKVNMT RYSGRPGTPA ADLPDLQDSV KKDRSRAVND HVTTLYHQKN SRWIGEEVGV VVTEQRKLGS VITRDERYQN IVIPEPLPFG MKCRVQIEQD CTYYFIGSLV
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