| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_2735 |
|---|
| Symbol | |
|---|
| ID | 7270843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 2866134 |
|---|
| End bp | 2867378 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643571326 |
|---|
| Product | methanogenesis marker 16 metalloprotein |
|---|
| Protein accession | YP_002467721 |
|---|
| Protein GI | 219853289 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1900] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03287] putative methanogenesis marker 16 metalloprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.911419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA TCGATGAGAT CAATCAAAAG ATCCGGGAGG GGACGGCGGT TGTGCTGACA
GCAGACGAGC TGAAGGCCCG GATCAGAGAG GGGGAGACGG TCACCCCCGA GAAGGTGGAT
GTCGTCACCA CCGGGACCTT CGGGGTGATG TCAGGGACGA TGGCGGTCCT CTCGTTTTCG
GTGGCGAAGC CGGGAACATT CCAGAAGGCC GAGCAGGTGC TGTTGAACGG GGTGCCAGCC
TACCCCGGCC CCTGTCCGAA CGAGCGGAAC GGGATCCTGG ATCTGGTGGT CTATGGGACC
GCCCACCGCG ACCACCGGTA CGGCGGCGGC CACCTCTTCC GGGATATCGT CGCAGGCCAT
GTGATCGCGG TCGAGGTTGT TGCAGGAGAG CAGACTCTGG AGACGATGAT CACCCTGAAC
CAGATGGGAT TGGCCCGGAT CATTGCAACA CGGATGGCGT TTCGGAACTA CCATGCGATG
ATCAACCGGT CGGTCGACCC GATCCAGACG ATCTTCTCAG TGACTGGTCT CGCTGGCCCG
TGCACCGAGG TCTCGGTCAG TGGTTGCGGA GAGATCAACC CGCTCGAGAA CGATCCCGAG
CGACGGTTCA TCGGCACCGG GACCAGGGTG TTGCTGAACG GCGGAACCGG GTACGTGATC
GGCGAGGGAA CCCGCTCCAG CCAGGAGAAA CCGAACCTCT CGGTCTATGG AGACATGAAG
GGGATGAACC CCCAGATGAT GGGGGGTTTC ATCACCTCAG TCGGACCCGA GTGCCTGACC
TCTCTCGCAG CTCCGATCCC GGTGCTCGAC CAGGCGGCGC TCGACCCGTT GCTGGTCCTC
GATGCAGAAG TCAATCTGCC GATCGCAGGG ATCAACGATC GGACAGGATG CGCAGCCTCG
AAGTACAGCG AGGTCTGGCA GGGAACCGAT CATCGGATCC AGAACGATCC GTCCGGCTGT
GTTCACTGCG AGACCTGCCG GGCGGCTACT CTCTGCCCGA CCGGGGCGAT CAGTCCGGGC
GCGGTGATCG ATCGGGACCG GTGTGTGAAC TGCGGAACCT GCGTGCAGGT CTGCCCTGGA
CCAGCCTTCT CCGGGATCCT CGGTGCAATC ACTTATGAGG GAAGGCAGGT GCCGATCACC
CTCCGCCAGT CGGATCGGAT CCGCGGCACA CGTCTCTGTG CCGAGCTCAA GGAGCGGATC
CGGGTCGGCA CCTTCAGTCT CACCAGGAAG GTCGATTCAC TATGA
|
|---|
| Protein sequence | MKTIDEINQK IREGTAVVLT ADELKARIRE GETVTPEKVD VVTTGTFGVM SGTMAVLSFS
VAKPGTFQKA EQVLLNGVPA YPGPCPNERN GILDLVVYGT AHRDHRYGGG HLFRDIVAGH
VIAVEVVAGE QTLETMITLN QMGLARIIAT RMAFRNYHAM INRSVDPIQT IFSVTGLAGP
CTEVSVSGCG EINPLENDPE RRFIGTGTRV LLNGGTGYVI GEGTRSSQEK PNLSVYGDMK
GMNPQMMGGF ITSVGPECLT SLAAPIPVLD QAALDPLLVL DAEVNLPIAG INDRTGCAAS
KYSEVWQGTD HRIQNDPSGC VHCETCRAAT LCPTGAISPG AVIDRDRCVN CGTCVQVCPG
PAFSGILGAI TYEGRQVPIT LRQSDRIRGT RLCAELKERI RVGTFSLTRK VDSL
|
|---|
| |